RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 PABPC3Q9H361 631 aaKnown RBP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 GPCPD1Q9NPB8 672 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 FAM205CA6NFA0 338 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 LRRC53A6NM62 1247 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 GOLGA8AA7E2F4 631 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 CAPN9O14815 690 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 KRT36O76013 467 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 TROVE2P10155 538 aaKnown RBP eCLIP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 GNAT2P19087 354 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 PMS2P54278 862 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 SLC34A1Q06495 639 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 AP1B1Q10567 949 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 SLC29A2Q14542 456 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 R3HDM1Q15032 1099 aaKnown RBP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 NAB2Q15742 525 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 ASTE1Q2TB18 679 aaPredicted RBP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 TMEM259Q4ZIN3 620 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 RC3H1Q5TC82 1133 aaKnown RBP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 RRAGAQ7L523 313 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 FAM133AQ8N9E0 248 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 ERMNQ8TAM6 284 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 UHMK1Q8TAS1 419 aaKnown RBP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 EPS8L3Q8TE67 593 aaKnown RBP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 SRPK1Q96SB4 655 aaKnown RBP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 ZNF184Q99676 751 aaPredicted RBP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 NOC4LQ9BVI4 516 aaKnown RBP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 LUC7LQ9NQ29 371 aaKnown RBP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 FAM207AQ9NSI2 230 aaPredicted RBP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 DBR1Q9UK59 544 aaKnown RBP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 TDRKHQ9Y2W6 561 aaKnown RBP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 TRIM75PA6NK02 468 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 NKRFO15226 690 aaKnown RBP eCLIP9.4□□□□□ -0.9
RETREG1-202ENST00000399793 MAP3K7O43318 606 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 ATP9BO43861 1147 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 TBX10O75333 385 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 ITGA4P13612 1032 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 SMARCA1P28370 1054 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 MTIF2P46199 727 aaKnown RBP9.4□□□□□ -0.9
RETREG1-202ENST00000399793 EIF4A1P60842 406 aaKnown RBP9.4□□□□□ -0.9
RETREG1-202ENST00000399793 RPS6KA1Q15418 735 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 ZCWPW2Q504Y3 356 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 MIIPQ5JXC2 388 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 ZNF362Q5T0B9 420 aaPredicted RBP9.4□□□□□ -0.9
RETREG1-202ENST00000399793 GRAMD4Q6IC98 578 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 ZNF449Q6P9G9 518 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 C4orf50Q6ZRC1 276 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 CYB5R4Q7L1T6 521 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 DAAM2Q86T65 1068 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 DEPTORQ8TB45 409 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 IRGQQ8WZA9 623 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 SEC14L1Q92503 715 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 NAP1L3Q99457 506 aaPredicted RBP9.4□□□□□ -0.9
RETREG1-202ENST00000399793 CLIC5Q9NZA1 410 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 RPL26L1Q9UNX3 145 aaKnown RBP9.4□□□□□ -0.9
RETREG1-202ENST00000399793 WDR19Q8NEZ3 1342 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 KRIT1O00522 736 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 NDUFB5O43674 189 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 T-ENOLP0DO92 83 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 UBAP2Q5T6F2 1119 aaKnown RBP9.4□□□□□ -0.9
RETREG1-202ENST00000399793 TAOK1Q7L7X3 1001 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 RIC3Q7Z5B4 369 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 NME8Q8N427 588 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 CSGALNACT2Q8N6G5 542 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 CFAP61Q8NHU2 1237 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 GDAP1Q8TB36 358 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 DTX3LQ8TDB6 740 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 ACTRT1Q8TDG2 376 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 EYA1Q99502 592 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 TRAIPQ9BWF2 469 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 KRT82Q9NSB4 513 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 DDX43Q9NXZ2 648 aaKnown RBP9.4□□□□□ -0.9
RETREG1-202ENST00000399793 UTP11Q9Y3A2 253 aaKnown RBP9.4□□□□□ -0.9
RETREG1-202ENST00000399793 UTYO14607 1347 aa9.4□□□□□ -0.9
RETREG1-202ENST00000399793 C3P01024 1663 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 MON2Q7Z3U7 1717 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 ZNF213O14771 459 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 RGL2O15211 777 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 KRT38O76015 456 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 MARK3P27448 753 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 ACVR2BQ13705 512 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 TTI2Q6NXR4 508 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 GGT6Q6P531 493 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 C16orf87Q6PH81 154 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 DSTYKQ6XUX3 929 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 SDR16C5Q8N3Y7 309 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 WASF1Q92558 559 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 CNOT6LQ96LI5 555 aaKnown RBP9.4□□□□□ -0.91
RETREG1-202ENST00000399793 DUSP9Q99956 384 aaKnown RBP9.4□□□□□ -0.91
RETREG1-202ENST00000399793 TRIM51Q9BSJ1 452 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 CUEDC2Q9H467 287 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 IL1RAPL1Q9NZN1 696 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 HEY1Q9Y5J3 304 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 MLH3Q9UHC1 1453 aa9.4□□□□□ -0.91
RETREG1-202ENST00000399793 TMEM120BA0PK00 339 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 PGRMC1O00264 195 aaKnown RBP9.39□□□□□ -0.91
RETREG1-202ENST00000399793 OR6B1O95007 311 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 HARSP12081 509 aaKnown RBP9.39□□□□□ -0.91
RETREG1-202ENST00000399793 CREB1P16220 341 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 PORP16435 677 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms