RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 PPP3CCP48454 512 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 CLCN6P51797 869 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 TRIM14Q14142 442 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 ATP13A4Q4VNC1 1196 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 NELFBQ8WX92 580 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 TMEM60Q9H2L4 133 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 VIPAS39Q9H9C1 493 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 ARHGAP26Q9UNA1 814 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 H3BRJ5 948 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 NPPAP01160 153 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 ALOX5P09917 674 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 ATP4AP20648 1035 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 BDNFP23560 247 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 CYP4F2P78329 520 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 CYP4F3Q08477 520 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 ANKDD1AQ495B1 522 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 TRIM59Q8IWR1 403 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 TRIM47Q96LD4 638 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 SLC12A5Q9H2X9 1139 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 PLEKHA4Q9H4M7 779 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 F8A1P23610 371 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 SYKP43405 635 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 DCAF17Q5H9S7 520 aaPredicted RBP13.66□□□□□ -0.22
CCBE1-201ENST00000398179 RRAGBQ5VZM2 374 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 MTRRQ9UBK8 725 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 RUVBL1Q9Y265 456 aaKnown RBP13.66□□□□□ -0.22
CCBE1-201ENST00000398179 SLC12A7Q9Y666 1083 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 ANKRD30BQ9BXX2 1392 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 MEN1O00255 615 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 SKAP2O75563 359 aaPredicted RBP13.66□□□□□ -0.22
CCBE1-201ENST00000398179 MTA2O94776 668 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 CSPG5O95196 566 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 PPARDQ03181 441 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 BNIPLQ7Z465 357 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 SSX3Q99909 188 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
CCBE1-201ENST00000398179 SLC6A15Q9H2J7 730 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 SUN2Q9UH99 717 aa13.66□□□□□ -0.22
CCBE1-201ENST00000398179 RUVBL2Q9Y230 463 aaKnown RBP13.66□□□□□ -0.22
CCBE1-201ENST00000398179 SRRM3A6NNA2 597 aaPredicted RBP13.65□□□□□ -0.22
CCBE1-201ENST00000398179 HAUS5O94927 633 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 PLEKHO1Q53GL0 409 aaPredicted RBP13.65□□□□□ -0.22
CCBE1-201ENST00000398179 OSBP2Q969R2 916 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 SLC26A6Q9BXS9 759 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 DAPK2Q9UIK4 370 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 GPC6Q9Y625 555 aaPredicted RBP13.65□□□□□ -0.22
CCBE1-201ENST00000398179 GAPVD1Q14C86 1478 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 GUCA1CO95843 209 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 MYCP01106 439 aaPredicted RBP13.65□□□□□ -0.22
CCBE1-201ENST00000398179 NPR2P20594 1047 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 TTMPQ5BVD1 217 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 GPR139Q6DWJ6 353 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 MAML1Q92585 1016 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 C2orf49Q9BVC5 232 aaPredicted RBP13.65□□□□□ -0.22
CCBE1-201ENST00000398179 ECT2Q9H8V3 914 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 LRPPRCP42704 1394 aaKnown RBP13.65□□□□□ -0.22
CCBE1-201ENST00000398179 ZNF644Q9H582 1327 aaPredicted RBP13.65□□□□□ -0.22
CCBE1-201ENST00000398179 F5H423 210 aaPredicted RBP13.65□□□□□ -0.22
CCBE1-201ENST00000398179 MFN2O95140 757 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 GSNP06396 782 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 IFNAR2P48551 515 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 DNM1Q05193 864 aaKnown RBP13.65□□□□□ -0.22
CCBE1-201ENST00000398179 CDC16Q13042 620 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 PDCD4Q53EL6 469 aaKnown RBP13.65□□□□□ -0.22
CCBE1-201ENST00000398179 CFAP70Q5T0N1 1121 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 GPR141Q7Z602 305 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 CAMK1DQ8IU85 385 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 AP1S2P56377 157 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 ACAP1Q15027 740 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 BMP2KLQ5H9B9 411 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 RIN3Q8TB24 985 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 FBXO40Q9UH90 709 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 ZNF879B4DU55 563 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
CCBE1-201ENST00000398179 MSH2P43246 934 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 GRIN1Q05586 938 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 RAPSNQ13702 412 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 C16orf72Q14CZ0 275 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 ALS2CLQ60I27 953 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 CCDC71Q8IV32 467 aaPredicted RBP13.65□□□□□ -0.22
CCBE1-201ENST00000398179 THRSPQ92748 146 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 MKL1Q969V6 931 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 HAUS4Q9H6D7 363 aa13.65□□□□□ -0.22
CCBE1-201ENST00000398179 SMCO2A6NFE2 343 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 PRKAR1BP31321 381 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 CHRNA3P32297 505 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 CCNHP51946 323 aaPredicted RBP13.64□□□□□ -0.23
CCBE1-201ENST00000398179 SULT1C3Q6IMI6 304 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 DUS1LQ6P1R4 473 aaKnown RBP13.64□□□□□ -0.23
CCBE1-201ENST00000398179 FBXO30Q8TB52 745 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 LRP2BPQ9P2M1 347 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 PRG3Q9Y2Y8 225 aaPredicted RBP13.64□□□□□ -0.23
CCBE1-201ENST00000398179 MINDY4BA8MYZ0 360 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 ATF6P18850 670 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 STX2P32856 288 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 RAB3GAP1Q15042 981 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 HEATR4Q86WZ0 1026 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 RHOT2Q8IXI1 618 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 DGCR14Q96DF8 476 aaKnown RBP13.64□□□□□ -0.23
CCBE1-201ENST00000398179 VPS50Q96JG6 964 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms