RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 HIC1Q14526 733 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 SLC44A4Q53GD3 710 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 TMC4Q7Z404 712 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 GGA1Q9UJY5 639 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 LPXNO60711 386 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 TMEM191BP0C7N4 346 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 DHX34Q14147 1143 aaKnown RBP16.06■□□□□ 0.16
CHL1-202ENST00000397491 NBPF20Q3BBV1 942 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 TRIM15Q9C019 465 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 ALDH8A1Q9H2A2 487 aaPredicted RBP16.06■□□□□ 0.16
CHL1-202ENST00000397491 ATG3Q9NT62 314 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.06■□□□□ 0.16
CHL1-202ENST00000397491 GPC5P78333 572 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 SLC12A1Q13621 1099 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 CNGA3Q16281 694 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 FBXO11Q86XK2 927 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 NBPF3Q9H094 633 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 ANKFY1Q9P2R3 1169 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 ATP7AQ04656 1500 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 TRIM59Q8IWR1 403 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 RIOK1Q9BRS2 568 aaKnown RBP16.06■□□□□ 0.16
CHL1-202ENST00000397491 HESX1Q9UBX0 185 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 MID2Q9UJV3 735 aa16.06■□□□□ 0.16
CHL1-202ENST00000397491 DBR1Q9UK59 544 aaKnown RBP16.06■□□□□ 0.16
CHL1-202ENST00000397491 SYNJ2BP-COX16A0A087WUM0 186 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 CAPN9O14815 690 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 CCDC22O60826 627 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 KRT38O76015 456 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 TJP3O95049 919 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 SNUPNO95149 360 aaKnown RBP16.05■□□□□ 0.16
CHL1-202ENST00000397491 PCCAP05165 728 aaPredicted RBP16.05■□□□□ 0.16
CHL1-202ENST00000397491 KCNH2Q12809 1159 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 KDM7AQ6ZMT4 941 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.05■□□□□ 0.16
CHL1-202ENST00000397491 CDHR2Q9BYE9 1310 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 FAM96AQ9H5X1 160 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 COX16Q9P0S2 106 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 ADD3Q9UEY8 706 aaKnown RBP16.05■□□□□ 0.16
CHL1-202ENST00000397491 SATB2Q9UPW6 733 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 SYCE1LA8MT33 242 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 ZRANB2O95218 330 aaKnown RBP eCLIP16.05■□□□□ 0.16
CHL1-202ENST00000397491 PAX7P23759 505 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 BZW1Q7L1Q6 419 aaKnown RBP16.05■□□□□ 0.16
CHL1-202ENST00000397491 RAB44Q7Z6P3 723 aaPredicted RBP16.05■□□□□ 0.16
CHL1-202ENST00000397491 PROM2Q8N271 834 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 ACCSQ96QU6 501 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 PIGSQ96S52 555 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 DDX28Q9NUL7 540 aaKnown RBP16.05■□□□□ 0.16
CHL1-202ENST00000397491 TESPA1A2RU30 521 aaPredicted RBP16.05■□□□□ 0.16
CHL1-202ENST00000397491 TRIM51Q9BSJ1 452 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 KIFC3Q9BVG8 833 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 ALG13Q9NP73 1137 aaKnown RBP16.05■□□□□ 0.16
CHL1-202ENST00000397491 TBC1D23Q9NUY8 699 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 SNX5Q9Y5X3 404 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 STK36Q9NRP7 1315 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 WDR64B1ANS9 1081 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 GNAT1P11488 350 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 MARK3P27448 753 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 CCNYQ8ND76 341 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 SNF8Q96H20 258 aa16.05■□□□□ 0.16
CHL1-202ENST00000397491 ITIH6Q6UXX5 1313 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 ENO1P06733 434 aaKnown RBP16.04■□□□□ 0.16
CHL1-202ENST00000397491 POLR2MP0CAP2 368 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 SCTRP47872 440 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 ITKQ08881 620 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 CNOT8Q9UFF9 292 aaKnown RBP16.04■□□□□ 0.16
CHL1-202ENST00000397491 LCMT1Q9UIC8 334 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 H0YCG3 227 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 PDHBP11177 359 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 AP1B1Q10567 949 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 LONRF1Q17RB8 773 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 FAM98CQ17RN3 349 aaKnown RBP16.04■□□□□ 0.16
CHL1-202ENST00000397491 PDXDC1Q6P996 788 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 ZBED8Q8IZ13 594 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 CCDC90BQ9GZT6 254 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 ZNF229Q9UJW7 825 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 PITPNM2Q9BZ72 1349 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 COPS2P61201 443 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 BRDTQ58F21 947 aaPredicted RBP16.04■□□□□ 0.16
CHL1-202ENST00000397491 KIAA1755Q5JYT7 1200 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 STRIP2Q9ULQ0 834 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 TMEM2Q9UHN6 1383 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 PSMD7P51665 324 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 DYNLL1P63167 89 aaKnown RBP16.04■□□□□ 0.16
CHL1-202ENST00000397491 ACBD5Q5T8D3 534 aaPredicted RBP16.04■□□□□ 0.16
CHL1-202ENST00000397491 RAPGEF5Q92565 580 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 FAF2Q96CS3 445 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 NPHS2Q9NP85 383 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 ADA2Q9NZK5 511 aa16.04■□□□□ 0.16
CHL1-202ENST00000397491 RAD51CO43502 376 aa16.03■□□□□ 0.16
CHL1-202ENST00000397491 MRPS15P82914 257 aaKnown RBP16.03■□□□□ 0.16
CHL1-202ENST00000397491 MDH1BQ5I0G3 518 aa16.03■□□□□ 0.16
CHL1-202ENST00000397491 TEDDM1Q5T9Z0 273 aa16.03■□□□□ 0.16
CHL1-202ENST00000397491 PPP1R2P3Q6NXS1 205 aa16.03■□□□□ 0.16
CHL1-202ENST00000397491 WDR93Q6P2C0 686 aa16.03■□□□□ 0.16
CHL1-202ENST00000397491 MMGT1Q8N4V1 131 aa16.03■□□□□ 0.16
CHL1-202ENST00000397491 ZFATQ9P243 1243 aa16.03■□□□□ 0.16
CHL1-202ENST00000397491 CCNL1Q9UK58 526 aaPredicted RBP16.03■□□□□ 0.16
CHL1-202ENST00000397491 FOSP01100 380 aaPredicted RBP16.03■□□□□ 0.16
CHL1-202ENST00000397491 CDC27P30260 824 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms