RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PAEPP09466 180 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 DRD4P21917 467 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 PPP2R2AP63151 447 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 DHX9Q08211 1270 aaKnown RBP15.18■□□□□ 0.02
NUP98-204ENST00000397004 TAF4BQ92750 862 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 TLCD1Q96CP7 247 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 MBOAT7Q96N66 472 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 SPAG5Q96R06 1193 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 GGA2Q9UJY4 613 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 PPATQ06203 517 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 ZNF211Q13398 564 aaPredicted RBP15.18■□□□□ 0.02
NUP98-204ENST00000397004 PEX26Q7Z412 305 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 FRMD5Q7Z6J6 570 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 DAAM2Q86T65 1068 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 TATDN2Q93075 761 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 RNF25Q96BH1 459 aaPredicted RBP15.18■□□□□ 0.02
NUP98-204ENST00000397004 HAUS2Q9NVX0 235 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 SUCLA2Q9P2R7 463 aaPredicted RBP15.18■□□□□ 0.02
NUP98-204ENST00000397004 PNMA2Q9UL42 364 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 FAM196BA6NMK8 535 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 FGGP02679 453 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 U2AF1L4Q8WU68 220 aaKnown RBP15.17■□□□□ 0.02
NUP98-204ENST00000397004 LRRC27Q9C0I9 530 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 CHORDC1Q9UHD1 332 aaPredicted RBP15.17■□□□□ 0.02
NUP98-204ENST00000397004 GREB1LQ9C091 1923 aaPredicted RBP15.17■□□□□ 0.02
NUP98-204ENST00000397004 EVI5O60447 810 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 ZDHHC24Q6UX98 284 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 CPNE8Q86YQ8 564 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 FUKQ8N0W3 1084 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 SLC35G2Q8TBE7 412 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 GCNT4Q9P109 453 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 EML1O00423 815 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 CYP4A11Q02928 519 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 QRICH1Q2TAL8 776 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 CCT6BQ92526 530 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 NT5C3AQ9H0P0 336 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 ATP8A1Q9Y2Q0 1164 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 PCDHAC2Q9Y5I4 1007 aa15.17■□□□□ 0.02
NUP98-204ENST00000397004 SRRM3A6NNA2 597 aaPredicted RBP15.16■□□□□ 0.02
NUP98-204ENST00000397004 TTLL1O95922 423 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 CBWD6Q4V339 395 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 ZC2HC1CQ53FD0 456 aaPredicted RBP15.16■□□□□ 0.02
NUP98-204ENST00000397004 CBWD3Q5JTY5 395 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 CBWD5Q5RIA9 395 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 SPATS2Q86XZ4 545 aaKnown RBP15.16■□□□□ 0.02
NUP98-204ENST00000397004 SIAH1Q8IUQ4 282 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 ZNF317Q96PQ6 595 aaPredicted RBP15.16■□□□□ 0.02
NUP98-204ENST00000397004 CYP3A7-CYP3A51PA0A087WV96 503 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 H0YHG0 523 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 RGL2O15211 777 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 PPFIA2O75334 1257 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 NR3C1P04150 777 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 CYP3A7P24462 503 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 MARCKSL1P49006 195 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 KLRC3Q07444 240 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 SYT2Q8N9I0 419 aaPredicted RBP15.16■□□□□ 0.02
NUP98-204ENST00000397004 RGL1Q9NZL6 768 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 MYO3BQ8WXR4 1341 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 PITPNM2Q9BZ72 1349 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 IFI35P80217 286 aaPredicted RBP15.16■□□□□ 0.02
NUP98-204ENST00000397004 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.16■□□□□ 0.02
NUP98-204ENST00000397004 ANO3Q9BYT9 981 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 PCDHB13Q9Y5F0 798 aa15.16■□□□□ 0.02
NUP98-204ENST00000397004 KDM3AQ9Y4C1 1321 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 XRCC5P13010 732 aaKnown RBP15.15■□□□□ 0.02
NUP98-204ENST00000397004 EPS15P42566 896 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 NFIAQ12857 509 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 PRR16Q569H4 304 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 RC3H1Q5TC82 1133 aaKnown RBP15.15■□□□□ 0.02
NUP98-204ENST00000397004 DUPD1Q68J44 220 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 LUC7LQ9NQ29 371 aaKnown RBP15.15■□□□□ 0.02
NUP98-204ENST00000397004 UBR3Q6ZT12 1888 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 ABCB4P21439 1286 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 SCTRP47872 440 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 PLS1Q14651 629 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 C10orf76Q5T2E6 689 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 TCERG1LQ5VWI1 586 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 FIZ1Q96SL8 496 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 BMP2KQ9NSY1 1161 aaPredicted RBP15.15■□□□□ 0.02
NUP98-204ENST00000397004 PCDHA3Q9Y5H8 950 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 MARCH6O60337 910 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 ATP2C2O75185 946 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 H2AFZP0C0S5 128 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 BIRC3Q13489 604 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 ERMARDQ5T6L9 678 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 AGBL2Q5U5Z8 902 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 PPP1R18Q6NYC8 613 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 H2AFVQ71UI9 128 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 ATXN2LQ8WWM7 1075 aaKnown RBP15.15■□□□□ 0.02
NUP98-204ENST00000397004 MYCBPQ99417 103 aaPredicted RBP15.15■□□□□ 0.02
NUP98-204ENST00000397004 THAP2Q9H0W7 228 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 A1CFQ9NQ94 594 aaKnown RBP15.15■□□□□ 0.02
NUP98-204ENST00000397004 TMOD4Q9NZQ9 345 aa15.15■□□□□ 0.02
NUP98-204ENST00000397004 RPTORQ8N122 1335 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 KRT71Q3SY84 523 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 PRR5LQ6MZQ0 368 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 CYB5D1Q6P9G0 228 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 PPP4R3CPQ6ZMV5 832 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 LRRC45Q96CN5 670 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 BHMT2Q9H2M3 363 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms