RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 MMP13P45452 471 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 POU5F1Q01860 360 aaKnown RBP17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 ORC2Q13416 577 aaPredicted RBP17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 SF3B3Q15393 1217 aaKnown RBP17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 DCAF12L1Q5VU92 463 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 PIGWQ7Z7B1 504 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 KIF2BQ8N4N8 673 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 DYDC1Q8WWB3 177 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 PRCCQ92733 491 aaPredicted RBP17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 TMOD4Q9NZQ9 345 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 GCNT4Q9P109 453 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 STK38LQ9Y2H1 464 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 ASAP2O43150 1006 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 UBOX5O94941 541 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 FGFR4P22455 802 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 SEPT2Q15019 361 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 FMNL3Q8IVF7 1028 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 ZNF652Q9Y2D9 606 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 PCDHB13Q9Y5F0 798 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 LOC102724428A0A0B4J2F2 783 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 GOLGA6L10A0A0M3HER8 536 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 MEIS1O00470 390 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 CLIC2O15247 247 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 CYP11B2P19099 503 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 CASP4P49662 377 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 SIK1P57059 783 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 OTUD6AQ7L8S5 288 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 CLEC10AQ8IUN9 316 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 TXLNGYQ9BZA5 131 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 MLXIPLQ9NP71 852 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 ZDHHC18Q9NUE0 388 aa17.8■□□□□ 0.44
EFEMP1-202ENST00000394555 AKAP3O75969 853 aa17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 PTENP60484 403 aa17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 DUPD1Q68J44 220 aa17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 DPY19L2P1Q6NXN4 242 aa17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 FOXR2Q6PJQ5 311 aa17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 C18orf8Q96DM3 657 aa17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 POTEFA5A3E0 1075 aa17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 POTEIP0CG38 1075 aa17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 ITIH4Q14624 930 aa17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 POTEGQ6S5H5 508 aa17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 POTEEQ6S8J3 1075 aa17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 CCDC25Q86WR0 208 aa17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 JAMLQ86YT9 394 aa17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 HOOK2Q96ED9 719 aa17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 RTCBQ9Y3I0 505 aaKnown RBP17.79■□□□□ 0.44
EFEMP1-202ENST00000394555 IGSF9BQ9UPX0 1349 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 DIAPH2O60879 1101 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 RTN2O75298 545 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 PDE6BP35913 854 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 MKRN4PQ13434 485 aaPredicted RBP17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 KIAA1755Q5JYT7 1200 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 NT5C3AQ9H0P0 336 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 ZNF287Q9HBT7 754 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 TRPC6Q9Y210 931 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 C15orf41Q9Y2V0 281 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 ESYT2A0FGR8 921 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 A8MUI8 341 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 KCNQ4P56696 695 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 KLRC3Q07444 240 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 LNX1Q8TBB1 728 aaPredicted RBP17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 SPDL1Q96EA4 605 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 PGM2Q96G03 612 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 BCAS3Q9H6U6 928 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 ECT2Q9H8V3 914 aa17.78■□□□□ 0.44
EFEMP1-202ENST00000394555 EIF4E1BA6NMX2 242 aaKnown RBP17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 TMEM110-MUSTN1A8MSY1 372 aa17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 EVI5O60447 810 aa17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 GSTA1P08263 222 aa17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 PEX19P40855 299 aa17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 PRKCIP41743 596 aa17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 PABPC4Q13310 644 aaKnown RBP eCLIP17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 EDRF1Q3B7T1 1238 aa17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 ARSHQ5FYA8 562 aa17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 NEDD1Q8NHV4 660 aa17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 CTNNBL1Q8WYA6 563 aaPredicted RBP17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 GPR101Q96P66 508 aaPredicted RBP17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 IGF2BP3O00425 579 aaKnown RBP eCLIP17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 NUDT17P0C025 328 aa17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 ALDH5A1P51649 535 aaPredicted RBP17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 EPHA7Q15375 998 aa17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 FRMD5Q7Z6J6 570 aa17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 SFR1Q86XK3 245 aa17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 NLRP3Q96P20 1036 aa17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 EBF2Q9HAK2 575 aa17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 COL22A1Q8NFW1 1626 aaPredicted RBP17.77■□□□□ 0.44
EFEMP1-202ENST00000394555 DCCP43146 1447 aa17.77■□□□□ 0.43
EFEMP1-202ENST00000394555 DDX3YO15523 660 aaKnown RBP17.77■□□□□ 0.43
EFEMP1-202ENST00000394555 NQO1P15559 274 aaKnown RBP17.77■□□□□ 0.43
EFEMP1-202ENST00000394555 PLCG2P16885 1265 aa17.77■□□□□ 0.43
EFEMP1-202ENST00000394555 GCKP35557 465 aa17.77■□□□□ 0.43
EFEMP1-202ENST00000394555 STAT1P42224 750 aa17.77■□□□□ 0.43
EFEMP1-202ENST00000394555 MAP2K1Q02750 393 aaPredicted RBP17.77■□□□□ 0.43
EFEMP1-202ENST00000394555 KNOP1Q1ED39 458 aaKnown RBP17.77■□□□□ 0.43
EFEMP1-202ENST00000394555 SPICE1Q8N0Z3 855 aa17.77■□□□□ 0.43
EFEMP1-202ENST00000394555 ZNF622Q969S3 477 aaKnown RBP eCLIP17.77■□□□□ 0.43
EFEMP1-202ENST00000394555 NSRP1Q9H0G5 558 aaKnown RBP17.77■□□□□ 0.43
EFEMP1-202ENST00000394555 IKZF4Q9H2S9 585 aa17.77■□□□□ 0.43
EFEMP1-202ENST00000394555 RIOX1Q9H6W3 641 aa17.77■□□□□ 0.43
EFEMP1-202ENST00000394555 FGFR1OP2Q9NVK5 253 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms