RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 SLC8A3P57103 927 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 BEX3Q00994 111 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 E2F4Q16254 413 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 ZNF484Q5JVG2 852 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 BTBD8Q5XKL5 378 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 CYP26C1Q6V0L0 522 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 ERMP1Q7Z2K6 904 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 TMEM192Q8IY95 271 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 SDR16C5Q8N3Y7 309 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 ZBED3Q96IU2 234 aaPredicted RBP8.88□□□□□ -0.99
LIMS1-203ENST00000393310 SH3GL1Q99961 368 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 TEKT3Q9BXF9 490 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 COL25A1Q9BXS0 654 aaPredicted RBP8.88□□□□□ -0.99
LIMS1-203ENST00000393310 IGSF9Q9P2J2 1179 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 PARP2Q9UGN5 583 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 SLC8A2Q9UPR5 921 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 NR3C2P08235 984 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 STRN3Q13033 797 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 PSMD6Q15008 389 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 PAN2Q504Q3 1202 aaKnown RBP8.88□□□□□ -0.99
LIMS1-203ENST00000393310 PPM1LQ5SGD2 360 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 MIER3Q7Z3K6 550 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 SDR42E1Q8WUS8 393 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 TBC1D22BQ9NU19 505 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 ANKFY1Q9P2R3 1169 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 MAP2P11137 1827 aaKnown RBP8.88□□□□□ -0.99
LIMS1-203ENST00000393310 FGF19O95750 216 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 S100BP04271 92 aaPredicted RBP8.88□□□□□ -0.99
LIMS1-203ENST00000393310 HSPA4P34932 840 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 TECP42680 631 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 TRMT1LQ7Z2T5 733 aaKnown RBP8.88□□□□□ -0.99
LIMS1-203ENST00000393310 PNMA1Q8ND90 353 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 USP44Q9H0E7 712 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 SPATA6Q9NWH7 488 aaPredicted RBP8.88□□□□□ -0.99
LIMS1-203ENST00000393310 ATP8B3O60423 1300 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 WDR19Q8NEZ3 1342 aa8.88□□□□□ -0.99
LIMS1-203ENST00000393310 GOLGA6L7A0A1B0GV03 622 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 GOLGA8AA7E2F4 631 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 GOLGA8BA8MQT2 603 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 CAPN9O14815 690 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 MRPL28Q13084 256 aaKnown RBP8.87□□□□□ -0.99
LIMS1-203ENST00000393310 CDC37Q16543 378 aaPredicted RBP8.87□□□□□ -0.99
LIMS1-203ENST00000393310 C1orf53Q5VUE5 145 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 SKAP1Q86WV1 359 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 DGKHQ86XP1 1220 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 PSTPIP2Q9H939 334 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 DCP1AQ9NPI6 582 aaPredicted RBP8.87□□□□□ -0.99
LIMS1-203ENST00000393310 CYP26B1Q9NR63 512 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 PKD2L1Q9P0L9 805 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 ZMYM5Q9UJ78 669 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 TPCN1Q9ULQ1 816 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 FAN1Q9Y2M0 1017 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 PRRG1O14668 218 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 GAS7O60861 476 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 SLFN5Q08AF3 891 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 CCDC15Q0P6D6 951 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 TRIM74Q86UV6 250 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 TRIM73Q86UV7 250 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 CCDC144CPQ8IYA2 1237 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 CCDC112Q8NEF3 446 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 SPACA7Q96KW9 195 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 HEMK1Q9Y5R4 338 aaPredicted RBP8.87□□□□□ -0.99
LIMS1-203ENST00000393310 NRCAMQ92823 1304 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 MYO9BQ13459 2157 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 H3BRB1 525 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 PRDM1O75626 825 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 AKR1B1P15121 316 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 KLRK1P26718 216 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 GBP1P32455 592 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 JAK3P52333 1124 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 ANKRD1Q15327 319 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 CEP128Q6ZU80 1094 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 THEM5Q8N1Q8 247 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 TMCO5AQ8N6Q1 288 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 KIF18AQ8NI77 898 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 E2F7Q96AV8 911 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 KLHL5Q96PQ7 755 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 TUT1Q9H6E5 874 aaKnown RBP8.87□□□□□ -0.99
LIMS1-203ENST00000393310 TUBE1Q9UJT0 475 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 CFAP45Q9UL16 551 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 ASAP2O43150 1006 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 UBXN2BQ14CS0 331 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 CCL14Q16627 93 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 WHAMMP3Q1A5X7 153 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 MORN1Q5T089 497 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 TTC30AQ86WT1 665 aa8.87□□□□□ -0.99
LIMS1-203ENST00000393310 FBXO16Q8IX29 292 aaPredicted RBP8.87□□□□□ -0.99
LIMS1-203ENST00000393310 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.86□□□□□ -0.99
LIMS1-203ENST00000393310 TYW5A2RUC4 315 aaKnown RBP8.86□□□□□ -0.99
LIMS1-203ENST00000393310 POLGP54098 1239 aaPredicted RBP8.86□□□□□ -0.99
LIMS1-203ENST00000393310 C16orf86Q6ZW13 317 aa8.86□□□□□ -0.99
LIMS1-203ENST00000393310 KCTD1Q719H9 257 aa8.86□□□□□ -0.99
LIMS1-203ENST00000393310 DEPTORQ8TB45 409 aa8.86□□□□□ -0.99
LIMS1-203ENST00000393310 ACER1Q8TDN7 264 aa8.86□□□□□ -0.99
LIMS1-203ENST00000393310 RANBP17Q9H2T7 1088 aaKnown RBP8.86□□□□□ -0.99
LIMS1-203ENST00000393310 EVLQ9UI08 416 aaPredicted RBP8.86□□□□□ -0.99
LIMS1-203ENST00000393310 DMPKQ09013 629 aa8.86□□□□□ -0.99
LIMS1-203ENST00000393310 SLC45A4Q5BKX6 768 aa8.86□□□□□ -0.99
LIMS1-203ENST00000393310 C12orf60Q5U649 245 aa8.86□□□□□ -0.99
LIMS1-203ENST00000393310 CCDC186Q7Z3E2 898 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms