RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 FGGP02679 453 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 CD58P19256 250 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 RASA1P20936 1047 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 ARL4AP40617 200 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 MAPK6Q16659 721 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 CEP55Q53EZ4 464 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 SLC10A4Q96EP9 437 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 VCX3BQ9H321 246 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 TAF6LQ9Y6J9 622 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 ARHGEF28Q8N1W1 1705 aaKnown RBP13.61□□□□□ -0.23
CLTC-202ENST00000393043 SALL3Q9BXA9 1300 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 VAMP7P51809 220 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 NNTQ13423 1086 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 SPOUT1Q5T280 376 aaKnown RBP13.61□□□□□ -0.23
CLTC-202ENST00000393043 ARHGEF18Q6ZSZ5 1173 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 CCDC197Q8NCU1 140 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 NCAPGQ9BPX3 1015 aa13.61□□□□□ -0.23
CLTC-202ENST00000393043 LRRD1A4D1F6 860 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 SPP2Q13103 211 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 ZNF667Q5HYK9 610 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 ERICH1Q86X53 443 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 TRIM42Q8IWZ5 723 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 TIPINQ9BVW5 301 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 BAIAP2L1Q9UHR4 511 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 HPS5Q9UPZ3 1129 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 KDM6AO15550 1401 aaPredicted RBP13.6□□□□□ -0.23
CLTC-202ENST00000393043 CNTNAP5Q8WYK1 1306 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 HMGB1P1B2RPK0 211 aaPredicted RBP13.6□□□□□ -0.23
CLTC-202ENST00000393043 PFDN6O15212 129 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 STAT3P40763 770 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 GCLMP48507 274 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 TNFAIP2Q03169 654 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.6□□□□□ -0.23
CLTC-202ENST00000393043 NLRP4Q96MN2 994 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 AP1M1Q9BXS5 423 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 GRID2IPA4D2P6 1211 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 PRPSAP2O60256 369 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 FCER1AP12319 257 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 CCT5P48643 541 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 PPP4CP60510 307 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 GFPT1Q06210 699 aaPredicted RBP13.6□□□□□ -0.23
CLTC-202ENST00000393043 NAA25Q14CX7 972 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 ANKRD40Q6AI12 368 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 OR6B2Q6IFH4 312 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 LDHDQ86WU2 507 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 KCTD6Q8NC69 237 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 TMEM35BQ8NCS4 154 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 SLC38A10Q9HBR0 1119 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 MAP2P11137 1827 aaKnown RBP13.6□□□□□ -0.23
CLTC-202ENST00000393043 DENND3A2RUS2 1198 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 STXBP3O00186 592 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 SLC16A4O15374 487 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 SF3A3Q12874 501 aaKnown RBP eCLIP13.6□□□□□ -0.235e-7■□□□□ 10.9
CLTC-202ENST00000393043 ENOSF1Q7L5Y1 443 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 PHLDB2Q86SQ0 1253 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 VCXQ9H320 206 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 ACAD9Q9H845 621 aa13.6□□□□□ -0.23
CLTC-202ENST00000393043 CNOT8Q9UFF9 292 aaKnown RBP13.6□□□□□ -0.23
CLTC-202ENST00000393043 GPR75-ASB3A0A0A6YYF3 556 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 FAM205CA6NFA0 338 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 SRGAP2BP0DMP2 458 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 MAP3K21Q5TCX8 1036 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 ARMCX2Q7L311 632 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 MTRQ99707 1265 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 ADAM22Q9P0K1 906 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 LPXNO60711 386 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 NOL3O60936 208 aaKnown RBP13.59□□□□□ -0.23
CLTC-202ENST00000393043 COPB2P35606 906 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 OSTNP61366 133 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 SLC7A5Q01650 507 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 KCTD17Q8N5Z5 321 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 MORC4Q8TE76 937 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 ZMYND12Q9H0C1 365 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 C2orf40Q9H1Z8 148 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 LRRC4Q9HBW1 653 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 ZNF302Q9NR11 478 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 IPO11Q9UI26 975 aaKnown RBP13.59□□□□□ -0.23
CLTC-202ENST00000393043 RASGRF2O14827 1237 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 TBXAS1P24557 533 aaPredicted RBP13.59□□□□□ -0.23
CLTC-202ENST00000393043 ARHGEF6Q15052 776 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 KRT39Q6A163 491 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 PDXDC1Q6P996 788 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 CALN1Q9BXU9 219 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 ESYT2A0FGR8 921 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 SLC16A3O15427 465 aaKnown RBP13.59□□□□□ -0.23
CLTC-202ENST00000393043 RNASELQ05823 741 aaKnown RBP13.59□□□□□ -0.23
CLTC-202ENST00000393043 MAP7Q14244 749 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 TAB3Q8N5C8 712 aaPredicted RBP13.59□□□□□ -0.23
CLTC-202ENST00000393043 LPAR1Q92633 364 aa13.59□□□□□ -0.23
CLTC-202ENST00000393043 RBM41Q96IZ5 413 aaKnown RBP13.59□□□□□ -0.23
CLTC-202ENST00000393043 HEXIM2Q96MH2 286 aaKnown RBP13.59□□□□□ -0.23
CLTC-202ENST00000393043 INTS2Q9H0H0 1204 aaKnown RBP13.59□□□□□ -0.23
CLTC-202ENST00000393043 SYNJ2BP-COX16A0A087WUM0 186 aa13.58□□□□□ -0.23
CLTC-202ENST00000393043 PDHBP11177 359 aa13.58□□□□□ -0.23
CLTC-202ENST00000393043 ZSCAN20P17040 1043 aaPredicted RBP13.58□□□□□ -0.23
CLTC-202ENST00000393043 MSH2P43246 934 aa13.58□□□□□ -0.23
CLTC-202ENST00000393043 ADCY2Q08462 1091 aa13.58□□□□□ -0.23
CLTC-202ENST00000393043 C6orf118Q5T5N4 469 aa13.58□□□□□ -0.23
CLTC-202ENST00000393043 PSPC1Q8WXF1 523 aaKnown RBP13.58□□□□□ -0.23
CLTC-202ENST00000393043 COX16Q9P0S2 106 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms