RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 PNMA8AQ86V59 439 aaPredicted RBP27.67■■■□□ 2.02
SHOX2-201ENST00000389589 CCDC155Q8N6L0 562 aa27.67■■■□□ 2.02
SHOX2-201ENST00000389589 NHEJ1Q9H9Q4 299 aaPredicted RBP27.67■■■□□ 2.02
SHOX2-201ENST00000389589 SLC25A27O95847 323 aa27.66■■■□□ 2.02
SHOX2-201ENST00000389589 PSMC2P35998 433 aaKnown RBP27.66■■■□□ 2.02
SHOX2-201ENST00000389589 ALDH5A1P51649 535 aaPredicted RBP27.66■■■□□ 2.02
SHOX2-201ENST00000389589 MYBPC2Q14324 1141 aa27.66■■■□□ 2.02
SHOX2-201ENST00000389589 NCAPG2Q86XI2 1143 aa27.66■■■□□ 2.02
SHOX2-201ENST00000389589 BAP1Q92560 729 aa27.66■■■□□ 2.02
SHOX2-201ENST00000389589 OPTNQ96CV9 577 aa27.66■■■□□ 2.02
SHOX2-201ENST00000389589 TMEM206Q9H813 350 aa27.66■■■□□ 2.02
SHOX2-201ENST00000389589 GABBR1Q9UBS5 961 aa27.66■■■□□ 2.02
SHOX2-201ENST00000389589 EIF3CLB5ME19 914 aaKnown RBP27.66■■■□□ 2.02
SHOX2-201ENST00000389589 IPO7O95373 1038 aaKnown RBP27.66■■■□□ 2.02
SHOX2-201ENST00000389589 CNTN2Q02246 1040 aa27.66■■■□□ 2.02
SHOX2-201ENST00000389589 UTP14CQ5TAP6 766 aaKnown RBP27.66■■■□□ 2.02
SHOX2-201ENST00000389589 EIF3CQ99613 913 aaKnown RBP27.66■■■□□ 2.02
SHOX2-201ENST00000389589 LSM14BQ9BX40 385 aaKnown RBP27.66■■■□□ 2.02
SHOX2-201ENST00000389589 ST6GALNAC4Q9H4F1 302 aa27.66■■■□□ 2.02
SHOX2-201ENST00000389589 POTEB2H3BUK9 544 aa27.65■■■□□ 2.02
SHOX2-201ENST00000389589 OSBPP22059 807 aa27.65■■■□□ 2.02
SHOX2-201ENST00000389589 PDXDC1Q6P996 788 aa27.65■■■□□ 2.02
SHOX2-201ENST00000389589 RRAGAQ7L523 313 aa27.65■■■□□ 2.02
SHOX2-201ENST00000389589 MAEAQ7L5Y9 396 aa27.65■■■□□ 2.02
SHOX2-201ENST00000389589 SYCP3Q8IZU3 236 aa27.65■■■□□ 2.02
SHOX2-201ENST00000389589 WDR24Q96S15 920 aa27.65■■■□□ 2.02
SHOX2-201ENST00000389589 AGPAT3Q9NRZ7 376 aa27.65■■■□□ 2.02
SHOX2-201ENST00000389589 DMAC2Q9NW81 257 aa27.65■■■□□ 2.02
SHOX2-201ENST00000389589 CGNQ9P2M7 1197 aaKnown RBP27.65■■■□□ 2.02
SHOX2-201ENST00000389589 MYO1AQ9UBC5 1043 aa27.65■■■□□ 2.02
SHOX2-201ENST00000389589 SLU7O95391 586 aaKnown RBP27.64■■■□□ 2.02
SHOX2-201ENST00000389589 MIS18BP1Q6P0N0 1132 aa27.64■■■□□ 2.02
SHOX2-201ENST00000389589 ANO5Q75V66 913 aa27.64■■■□□ 2.02
SHOX2-201ENST00000389589 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.64■■■□□ 2.02
SHOX2-201ENST00000389589 SLC9A9Q8IVB4 645 aa27.64■■■□□ 2.02
SHOX2-201ENST00000389589 SYN2Q92777 582 aaPredicted RBP27.64■■■□□ 2.02
SHOX2-201ENST00000389589 PAGR1Q9BTK6 254 aa27.64■■■□□ 2.02
SHOX2-201ENST00000389589 CASP4P49662 377 aa27.64■■■□□ 2.01
SHOX2-201ENST00000389589 ACTR2P61160 394 aa27.64■■■□□ 2.01
SHOX2-201ENST00000389589 ZNF662Q6ZS27 426 aa27.64■■■□□ 2.01
SHOX2-201ENST00000389589 FAM186BQ8IYM0 893 aa27.64■■■□□ 2.01
SHOX2-201ENST00000389589 ACCSQ96QU6 501 aa27.64■■■□□ 2.01
SHOX2-201ENST00000389589 REXO2Q9Y3B8 237 aaKnown RBP27.64■■■□□ 2.01
SHOX2-201ENST00000389589 LRRC53A6NM62 1247 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 GRIN3BO60391 1043 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 CNMDO75829 334 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 NOL4O94818 638 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 MOGSQ13724 837 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 LDLRAD1Q5T700 205 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 ABHD15Q6UXT9 468 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 KSR1Q8IVT5 923 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 TMEM174Q8WUU8 243 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 BORCS6Q96GS4 357 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 CCDC42Q96M95 316 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 FRMD4BQ9Y2L6 1034 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 EDNRBP24530 442 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 PLA2G4FQ68DD2 849 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 SWSAP1Q6NVH7 229 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 HAUS4Q9H6D7 363 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 PLCB1Q9NQ66 1216 aa27.63■■■□□ 2.01
SHOX2-201ENST00000389589 TMEM150BA6NC51 233 aa27.62■■■□□ 2.01
SHOX2-201ENST00000389589 UNCXA6NJT0 531 aa27.62■■■□□ 2.01
SHOX2-201ENST00000389589 FANCGO15287 622 aa27.62■■■□□ 2.01
SHOX2-201ENST00000389589 PEX10O60683 326 aa27.62■■■□□ 2.01
SHOX2-201ENST00000389589 ARHGAP25P42331 645 aa27.62■■■□□ 2.01
SHOX2-201ENST00000389589 NPEPPSP55786 919 aa27.62■■■□□ 2.01
SHOX2-201ENST00000389589 SNRPFP62306 86 aaKnown RBP27.62■■■□□ 2.01
SHOX2-201ENST00000389589 DCAF17Q5H9S7 520 aaPredicted RBP27.62■■■□□ 2.01
SHOX2-201ENST00000389589 SLC35C1Q96A29 364 aa27.62■■■□□ 2.01
SHOX2-201ENST00000389589 ERO1AQ96HE7 468 aa27.62■■■□□ 2.01
SHOX2-201ENST00000389589 CRACR2AQ9BSW2 395 aa27.62■■■□□ 2.01
SHOX2-201ENST00000389589 A0A0U1RQJ8 604 aa27.61■■■□□ 2.01
SHOX2-201ENST00000389589 GTPBP10A4D1E9 387 aaKnown RBP27.61■■■□□ 2.01
SHOX2-201ENST00000389589 URI1O94763 535 aaPredicted RBP27.61■■■□□ 2.01
SHOX2-201ENST00000389589 GTF2BQ00403 316 aa27.61■■■□□ 2.01
SHOX2-201ENST00000389589 FAM133AQ8N9E0 248 aa27.61■■■□□ 2.01
SHOX2-201ENST00000389589 ATRIPQ8WXE1 791 aa27.61■■■□□ 2.01
SHOX2-201ENST00000389589 MPHOSPH6Q99547 160 aaKnown RBP27.61■■■□□ 2.01
SHOX2-201ENST00000389589 LRRC37A2A6NM11 1700 aa27.61■■■□□ 2.01
SHOX2-201ENST00000389589 ZNF862O60290 1169 aa27.61■■■□□ 2.01
SHOX2-201ENST00000389589 STBD1O95210 358 aa27.61■■■□□ 2.01
SHOX2-201ENST00000389589 SUPT20HL2P0C7V6 817 aa27.61■■■□□ 2.01
SHOX2-201ENST00000389589 NCKAP1LP55160 1127 aa27.61■■■□□ 2.01
SHOX2-201ENST00000389589 FAM102BQ5T8I3 360 aa27.61■■■□□ 2.01
SHOX2-201ENST00000389589 TCERG1LQ5VWI1 586 aa27.61■■■□□ 2.01
SHOX2-201ENST00000389589 KIFAP3Q92845 792 aa27.61■■■□□ 2.01
SHOX2-201ENST00000389589 CEP170P1Q96L14 293 aa27.61■■■□□ 2.01
SHOX2-201ENST00000389589 C17orf75Q9HAS0 396 aa27.61■■■□□ 2.01
SHOX2-201ENST00000389589 SOWAHBA6NEL2 793 aa27.6■■■□□ 2.01
SHOX2-201ENST00000389589 HAUS6Q7Z4H7 955 aa27.6■■■□□ 2.01
SHOX2-201ENST00000389589 C12orf56Q8IXR9 622 aa27.6■■■□□ 2.01
SHOX2-201ENST00000389589 SH2D3AQ9BRG2 576 aa27.6■■■□□ 2.01
SHOX2-201ENST00000389589 IKZF4Q9H2S9 585 aa27.6■■■□□ 2.01
SHOX2-201ENST00000389589 SMTNP53814 917 aa27.6■■■□□ 2.01
SHOX2-201ENST00000389589 POLR2FP61218 127 aaKnown RBP27.6■■■□□ 2.01
SHOX2-201ENST00000389589 SNAPC2Q13487 334 aa27.6■■■□□ 2.01
SHOX2-201ENST00000389589 EXOC3L4Q17RC7 722 aa27.6■■■□□ 2.01
SHOX2-201ENST00000389589 GBP6Q6ZN66 633 aa27.6■■■□□ 2.01
SHOX2-201ENST00000389589 CCDC60Q8IWA6 550 aaPredicted RBP27.6■■■□□ 2.01
SHOX2-201ENST00000389589 HVCN1Q96D96 273 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms