RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 GOLGA8BA8MQT2 603 aa18.15■□□□□ 0.5
VCX3A-201ENST00000381089 PPM1AP35813 382 aa18.15■□□□□ 0.5
VCX3A-201ENST00000381089 SIGLEC14Q08ET2 396 aa18.15■□□□□ 0.5
VCX3A-201ENST00000381089 SMAP1Q8IYB5 467 aaPredicted RBP18.15■□□□□ 0.5
VCX3A-201ENST00000381089 ABI1Q8IZP0 508 aa18.15■□□□□ 0.5
VCX3A-201ENST00000381089 ZNF710Q8N1W2 664 aa18.15■□□□□ 0.5
VCX3A-201ENST00000381089 FBXL6Q8N531 539 aa18.15■□□□□ 0.5
VCX3A-201ENST00000381089 TMEM40Q8WWA1 233 aa18.15■□□□□ 0.5
VCX3A-201ENST00000381089 ZNF577Q9BSK1 485 aa18.15■□□□□ 0.5
VCX3A-201ENST00000381089 CDHR5Q9HBB8 845 aa18.15■□□□□ 0.5
VCX3A-201ENST00000381089 NGRNQ9NPE2 291 aaKnown RBP18.15■□□□□ 0.5
VCX3A-201ENST00000381089 ENTPD7Q9NQZ7 604 aa18.15■□□□□ 0.5
VCX3A-201ENST00000381089 MAGEB2O15479 319 aa18.14■□□□□ 0.49
VCX3A-201ENST00000381089 PSAPP07602 524 aa18.14■□□□□ 0.49
VCX3A-201ENST00000381089 ZSCAN20P17040 1043 aaPredicted RBP18.14■□□□□ 0.49
VCX3A-201ENST00000381089 TMOD1P28289 359 aa18.14■□□□□ 0.49
VCX3A-201ENST00000381089 CLK2P49760 499 aaKnown RBP18.14■□□□□ 0.49
VCX3A-201ENST00000381089 ERVFC1P60507 584 aa18.14■□□□□ 0.49
VCX3A-201ENST00000381089 PLCB3Q01970 1234 aa18.14■□□□□ 0.49
VCX3A-201ENST00000381089 KRT17Q04695 432 aa18.14■□□□□ 0.49
VCX3A-201ENST00000381089 COL9A3Q14050 684 aaPredicted RBP18.14■□□□□ 0.49
VCX3A-201ENST00000381089 PLPP4Q5VZY2 271 aa18.14■□□□□ 0.49
VCX3A-201ENST00000381089 ZNF746Q6NUN9 644 aaPredicted RBP18.14■□□□□ 0.49
VCX3A-201ENST00000381089 FAM228AQ86W67 206 aa18.14■□□□□ 0.49
VCX3A-201ENST00000381089 CCDC12Q8WUD4 166 aaPredicted RBP18.14■□□□□ 0.49
VCX3A-201ENST00000381089 SUSD6Q92537 303 aa18.14■□□□□ 0.49
VCX3A-201ENST00000381089 MRPS27Q92552 414 aaKnown RBP18.14■□□□□ 0.49
VCX3A-201ENST00000381089 FAM167AQ96KS9 214 aa18.14■□□□□ 0.49
VCX3A-201ENST00000381089 MAP7D2Q96T17 732 aa18.14■□□□□ 0.49
VCX3A-201ENST00000381089 PPP1R16BQ96T49 567 aa18.14■□□□□ 0.49
VCX3A-201ENST00000381089 TMEM117Q9H0C3 514 aa18.14■□□□□ 0.49
VCX3A-201ENST00000381089 EVPLQ92817 2033 aa18.14■□□□□ 0.49
VCX3A-201ENST00000381089 CCDC196A0A1B0GTZ2 297 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 FAM86B1E9PN63 330 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 FSCN2O14926 492 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 C22orf31O95567 290 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 CYP3A4P08684 503 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 FAM86B2P0C5J1 330 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 FGFR1P11362 822 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 HOXB8P17481 243 aaPredicted RBP18.13■□□□□ 0.49
VCX3A-201ENST00000381089 TECP42680 631 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 RCAN1P53805 252 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 FAM189BP81408 668 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 FGD1P98174 961 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 FUT2Q10981 343 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 JAKMIP3Q5VZ66 844 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 TMEM184AQ6ZMB5 413 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 DHX32Q7L7V1 743 aaKnown RBP18.13■□□□□ 0.49
VCX3A-201ENST00000381089 ZBTB33Q86T24 672 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 LRRC43Q8N309 656 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 RASGRP4Q8TDF6 673 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 TCF25Q9BQ70 676 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 IRF2BPLQ9H1B7 796 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 NAP1L2Q9ULW6 460 aaPredicted RBP18.13■□□□□ 0.49
VCX3A-201ENST00000381089 AKT3Q9Y243 479 aa18.13■□□□□ 0.49
VCX3A-201ENST00000381089 MAFBQ9Y5Q3 323 aaPredicted RBP18.13■□□□□ 0.49
VCX3A-201ENST00000381089 MYH9P35579 1960 aaKnown RBP18.13■□□□□ 0.49
VCX3A-201ENST00000381089 KLF18A0A0U1RQI7 1052 aa18.12■□□□□ 0.49
VCX3A-201ENST00000381089 ZBTB42B2RXF5 422 aa18.12■□□□□ 0.49
VCX3A-201ENST00000381089 DHX15O43143 795 aaKnown RBP18.12■□□□□ 0.49
VCX3A-201ENST00000381089 VTNP04004 478 aa18.12■□□□□ 0.49
VCX3A-201ENST00000381089 KRT32Q14532 448 aa18.12■□□□□ 0.49
VCX3A-201ENST00000381089 BMS1Q14692 1282 aaKnown RBP18.12■□□□□ 0.49
VCX3A-201ENST00000381089 ANKRD54Q6NXT1 300 aa18.12■□□□□ 0.49
VCX3A-201ENST00000381089 TRMT1LQ7Z2T5 733 aaKnown RBP18.12■□□□□ 0.49
VCX3A-201ENST00000381089 PRSS33Q8NF86 280 aa18.12■□□□□ 0.49
VCX3A-201ENST00000381089 ZNF558Q96NG5 402 aa18.12■□□□□ 0.49
VCX3A-201ENST00000381089 CWH43Q9H720 699 aa18.12■□□□□ 0.49
VCX3A-201ENST00000381089 C6orf50Q9HD87 102 aa18.12■□□□□ 0.49
VCX3A-201ENST00000381089 NR2E1Q9Y466 385 aa18.12■□□□□ 0.49
VCX3A-201ENST00000381089 SAMM50Q9Y512 469 aa18.12■□□□□ 0.49
VCX3A-201ENST00000381089 PCDHA10Q9Y5I2 948 aa18.12■□□□□ 0.49
VCX3A-201ENST00000381089 IGLV3-22A0A075B6J6 115 aa18.11■□□□□ 0.49
VCX3A-201ENST00000381089 GPR32O75388 356 aa18.11■□□□□ 0.49
VCX3A-201ENST00000381089 HMGB1P09429 215 aaKnown RBP18.11■□□□□ 0.49
VCX3A-201ENST00000381089 EXOSC10Q01780 885 aaKnown RBP18.11■□□□□ 0.49
VCX3A-201ENST00000381089 PTPN21Q16825 1174 aa18.11■□□□□ 0.49
VCX3A-201ENST00000381089 PFKFB3Q16875 520 aaPredicted RBP18.11■□□□□ 0.49
VCX3A-201ENST00000381089 KCNT2Q6UVM3 1135 aa18.11■□□□□ 0.49
VCX3A-201ENST00000381089 TMC7Q7Z402 723 aa18.11■□□□□ 0.49
VCX3A-201ENST00000381089 REXO1Q8N1G1 1221 aaKnown RBP18.11■□□□□ 0.49
VCX3A-201ENST00000381089 VN1R2Q8NFZ6 395 aa18.11■□□□□ 0.49
VCX3A-201ENST00000381089 GABBR1Q9UBS5 961 aa18.11■□□□□ 0.49
VCX3A-201ENST00000381089 BRPF3Q9ULD4 1205 aa18.11■□□□□ 0.49
VCX3A-201ENST00000381089 ZDBF2Q9HCK1 2354 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 ESYT2A0FGR8 921 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 ATP4AP20648 1035 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 GNA11P29992 359 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 METAP2P50579 478 aaKnown RBP eCLIP18.1■□□□□ 0.49
VCX3A-201ENST00000381089 NLRP11P59045 1033 aaKnown RBP18.1■□□□□ 0.49
VCX3A-201ENST00000381089 RBM10P98175 930 aaKnown RBP18.1■□□□□ 0.49
VCX3A-201ENST00000381089 APOBRQ0VD83 1088 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 DSC3Q14574 896 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 TPRNQ4KMQ1 711 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 IER5LQ5T953 404 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 LLGL2Q6P1M3 1020 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 CASP10Q92851 521 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 TCEANC2Q96MN5 208 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 SCLT1Q96NL6 688 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 CASD1Q96PB1 797 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms