RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 STBD1O95210 358 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 MRPS9P82933 396 aaKnown RBP10.51□□□□□ -0.73
TRIM39-202ENST00000376659 CTTNQ14247 550 aaKnown RBP10.51□□□□□ -0.73
TRIM39-202ENST00000376659 CCDC40Q4G0X9 1142 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 FAM83AQ86UY5 434 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 ANKRD13CQ8N6S4 541 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 USP38Q8NB14 1042 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 TPCN2Q8NHX9 752 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 ACTRT1Q8TDG2 376 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 AGPAT3Q9NRZ7 376 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 RGS17Q9UGC6 210 aaPredicted RBP10.51□□□□□ -0.73
TRIM39-202ENST00000376659 TSKSQ9UJT2 592 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 INTUQ9ULD6 942 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 UBIAD1Q9Y5Z9 338 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 NFS1Q9Y697 457 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 USO1O60763 962 aaKnown RBP10.51□□□□□ -0.73
TRIM39-202ENST00000376659 LYPLA2O95372 231 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 FAM153BP0C7A2 387 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 CYP4A11Q02928 519 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 KIF22Q14807 665 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 FAM153CQ494X1 144 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 LRRC31Q6UY01 552 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 CNKSR1Q969H4 720 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 ZNF622Q969S3 477 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRIM39-202ENST00000376659 TXLNGYQ9BZA5 131 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 ST6GALNAC4Q9H4F1 302 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 RNF14Q9UBS8 474 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 FAM153AQ9UHL3 310 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 TTC7AQ9ULT0 858 aaPredicted RBP10.51□□□□□ -0.73
TRIM39-202ENST00000376659 PMM2O15305 246 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 CALUO43852 315 aaPredicted RBP10.5□□□□□ -0.73
TRIM39-202ENST00000376659 HADHBP55084 474 aaKnown RBP10.5□□□□□ -0.73
TRIM39-202ENST00000376659 NPEPPSP55786 919 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 TRADDQ15628 312 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 TSR1Q2NL82 804 aaKnown RBP10.5□□□□□ -0.73
TRIM39-202ENST00000376659 CEP55Q53EZ4 464 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 FOXR1Q6PIV2 292 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 KSR1Q8IVT5 923 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 IQCKQ8N0W5 287 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 EIF1ADQ8N9N8 165 aaKnown RBP10.5□□□□□ -0.73
TRIM39-202ENST00000376659 ERMNQ8TAM6 284 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 PIGOQ8TEQ8 1089 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRIM39-202ENST00000376659 SEL1LQ9UBV2 794 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 SPDYE3A6NKU9 549 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 CETN3O15182 167 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 MAPTP10636 758 aaKnown RBP10.5□□□□□ -0.73
TRIM39-202ENST00000376659 MCM3P25205 808 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 SETQ01105 290 aaPredicted RBP10.5□□□□□ -0.73
TRIM39-202ENST00000376659 ASIC2Q16515 512 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 EPC2Q52LR7 807 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 CD302Q8IX05 232 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 TXLNBQ8N3L3 684 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 CASKIN2Q8WXE0 1202 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 VPS33BQ9H267 617 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 JADE2Q9NQC1 790 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 ARMCX3Q9UH62 379 aaPredicted RBP10.5□□□□□ -0.73
TRIM39-202ENST00000376659 PACSIN2Q9UNF0 486 aaPredicted RBP10.5□□□□□ -0.73
TRIM39-202ENST00000376659 FTCDO95954 541 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 ICAM1P05362 532 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 CAPN2P17655 700 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 NT5DC3Q86UY8 548 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 C1orf131Q8NDD1 294 aaKnown RBP10.5□□□□□ -0.73
TRIM39-202ENST00000376659 ZSWIM2Q8NEG5 633 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 REPS2Q8NFH8 660 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 KCNN1Q92952 543 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 MXRA8Q9BRK3 442 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 TMEM39BQ9GZU3 492 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 VPS18Q9P253 973 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 ADAMTS1Q9UHI8 967 aa10.5□□□□□ -0.73
TRIM39-202ENST00000376659 DBR1Q9UK59 544 aaKnown RBP10.5□□□□□ -0.73
TRIM39-202ENST00000376659 INPP5BP32019 993 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 FMO5P49326 533 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 SLC7A5Q01650 507 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 MYBPC2Q14324 1141 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 PALB2Q86YC2 1186 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 PCMTD1Q96MG8 357 aaPredicted RBP10.49□□□□□ -0.73
TRIM39-202ENST00000376659 ALS2CR12Q96Q35 445 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 POLD4Q9HCU8 107 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 FBXO28Q9NVF7 368 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 GCNT4Q9P109 453 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 COG5Q9UP83 839 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 SHTN1A0MZ66 631 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 AKR1B10O60218 316 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 GFPT2O94808 682 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 UGCGQ16739 394 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 EXOC3L4Q17RC7 722 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 LRCH2Q5VUJ6 765 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 PHLDB3Q6NSJ2 640 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 GOLGA5Q8TBA6 731 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 RIT2Q99578 217 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 NEUROG2Q9H2A3 272 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 FAM204AQ9H8W3 233 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 AGO4Q9HCK5 861 aaKnown RBP10.49□□□□□ -0.73
TRIM39-202ENST00000376659 GOPCQ9HD26 462 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 FEM1BQ9UK73 627 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 DAAM1Q9Y4D1 1078 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 BZW2Q9Y6E2 419 aaKnown RBP10.49□□□□□ -0.73
TRIM39-202ENST00000376659 ZNF233A6NK53 670 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 KIF4AO95239 1232 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms