RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 NSMCE1Q8WV22 266 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 THOC1Q96FV9 657 aaKnown RBP17.92■□□□□ 0.46
TRIM39-201ENST00000376656 PGM2Q96G03 612 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 DAAM1Q9Y4D1 1078 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 KRT18P05783 430 aaKnown RBP17.92■□□□□ 0.46
TRIM39-201ENST00000376656 IFNAR2P48551 515 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 JAM2P57087 298 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 SLC29A2Q14542 456 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 ARSHQ5FYA8 562 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 TCERG1LQ5VWI1 586 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 DENND2CQ68D51 928 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 TRPM8Q7Z2W7 1104 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 CCDC24Q8N4L8 307 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 EBF2Q9HAK2 575 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 INTS9Q9NV88 658 aaKnown RBP17.92■□□□□ 0.46
TRIM39-201ENST00000376656 IGSF9BQ9UPX0 1349 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 GFPT2O94808 682 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 VIMP08670 466 aaKnown RBP17.92■□□□□ 0.46
TRIM39-201ENST00000376656 HYIQ5T013 277 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 ZDHHC24Q6UX98 284 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 PPP4R3CPQ6ZMV5 832 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 C16orf86Q6ZW13 317 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 FRMD5Q7Z6J6 570 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 VPS36Q86VN1 386 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 FBXO25Q8TCJ0 367 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 NT5C3AQ9H0P0 336 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 SAMD15Q9P1V8 674 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 GGT7Q9UJ14 662 aa17.92■□□□□ 0.46
TRIM39-201ENST00000376656 TTC7AQ9ULT0 858 aaPredicted RBP17.92■□□□□ 0.46
TRIM39-201ENST00000376656 RGS16O15492 202 aaPredicted RBP17.91■□□□□ 0.46
TRIM39-201ENST00000376656 BAG3O95817 575 aa17.91■□□□□ 0.46
TRIM39-201ENST00000376656 NPEPPSP55786 919 aa17.91■□□□□ 0.46
TRIM39-201ENST00000376656 PPP2R5AQ15172 486 aa17.91■□□□□ 0.46
TRIM39-201ENST00000376656 SLC35G2Q8TBE7 412 aa17.91■□□□□ 0.46
TRIM39-201ENST00000376656 AKAP3O75969 853 aa17.91■□□□□ 0.46
TRIM39-201ENST00000376656 XRCC5P13010 732 aaKnown RBP17.91■□□□□ 0.46
TRIM39-201ENST00000376656 BRD2P25440 801 aaKnown RBP17.91■□□□□ 0.46
TRIM39-201ENST00000376656 HOXD13P35453 343 aa17.91■□□□□ 0.46
TRIM39-201ENST00000376656 OLIG1Q8TAK6 271 aa17.91■□□□□ 0.46
TRIM39-201ENST00000376656 RSRC1Q96IZ7 334 aaKnown RBP17.91■□□□□ 0.46
TRIM39-201ENST00000376656 SLC24A3Q9HC58 644 aa17.91■□□□□ 0.46
TRIM39-201ENST00000376656 KDM3AQ9Y4C1 1321 aa17.91■□□□□ 0.46
TRIM39-201ENST00000376656 DDX60LQ5H9U9 1706 aaKnown RBP17.91■□□□□ 0.46
TRIM39-201ENST00000376656 ABCB4P21439 1286 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 HOOK2Q96ED9 719 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 ZNF287Q9HBT7 754 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 CCDC169A6NNP5 214 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 SKAP2O75563 359 aaPredicted RBP17.9■□□□□ 0.46
TRIM39-201ENST00000376656 SLCO1A2P46721 670 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 KCNJ2P63252 427 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 JAMLQ86YT9 394 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 ANKRD2Q9GZV1 360 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 SEMA4AQ9H3S1 761 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 GPCPD1Q9NPB8 672 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 GCNT4Q9P109 453 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 INTUQ9ULD6 942 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 AFF2P51816 1311 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 RPTORQ8N122 1335 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 hCG_1984214I3L0E3 225 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 ANP32DO95626 131 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 STAT3P40763 770 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 CASP4P49662 377 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 AADACL2Q6P093 401 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 CRELD2Q6UXH1 353 aaPredicted RBP17.9■□□□□ 0.46
TRIM39-201ENST00000376656 SMIM5Q71RC9 77 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 GLYCTKQ8IVS8 523 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 LRRC47Q8N1G4 583 aaKnown RBP17.9■□□□□ 0.46
TRIM39-201ENST00000376656 ZNF713Q8N859 430 aaPredicted RBP17.9■□□□□ 0.46
TRIM39-201ENST00000376656 EPS8L3Q8TE67 593 aaKnown RBP17.9■□□□□ 0.46
TRIM39-201ENST00000376656 AGAP11Q8TF27 550 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 TRPC6Q9Y210 931 aa17.9■□□□□ 0.46
TRIM39-201ENST00000376656 KIAA0391O15091 583 aaKnown RBP17.89■□□□□ 0.45
TRIM39-201ENST00000376656 PPP1R11O60927 126 aaPredicted RBP17.89■□□□□ 0.45
TRIM39-201ENST00000376656 PPP4CP60510 307 aa17.89■□□□□ 0.45
TRIM39-201ENST00000376656 RIPK1Q13546 671 aa17.89■□□□□ 0.45
TRIM39-201ENST00000376656 KIAA1755Q5JYT7 1200 aa17.89■□□□□ 0.45
TRIM39-201ENST00000376656 TRIM6Q9C030 488 aaPredicted RBP17.89■□□□□ 0.45
TRIM39-201ENST00000376656 TRAF3IP3Q9Y228 551 aa17.89■□□□□ 0.45
TRIM39-201ENST00000376656 CD2APQ9Y5K6 639 aa17.89■□□□□ 0.45
TRIM39-201ENST00000376656 ATP8B3O60423 1300 aa17.89■□□□□ 0.45
TRIM39-201ENST00000376656 MED24O75448 989 aa17.89■□□□□ 0.45
TRIM39-201ENST00000376656 UBOX5O94941 541 aa17.89■□□□□ 0.45
TRIM39-201ENST00000376656 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
TRIM39-201ENST00000376656 ANXA13P27216 316 aa17.89■□□□□ 0.45
TRIM39-201ENST00000376656 PLS1Q14651 629 aa17.89■□□□□ 0.45
TRIM39-201ENST00000376656 KCNMB3Q9NPA1 279 aa17.89■□□□□ 0.45
TRIM39-201ENST00000376656 C15orf41Q9Y2V0 281 aa17.89■□□□□ 0.45
TRIM39-201ENST00000376656 IRS2Q9Y4H2 1338 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 POTEFA5A3E0 1075 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 POTEIP0CG38 1075 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 SLC12A3P55017 1021 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 PPATQ06203 517 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 KNOP1Q1ED39 458 aaKnown RBP17.88■□□□□ 0.45
TRIM39-201ENST00000376656 POTEGQ6S5H5 508 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 POTEEQ6S8J3 1075 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 MAB21L3Q8N8X9 362 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 SLC30A5Q8TAD4 765 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 SLAIN2Q9P270 581 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 CFAP73A6NFT4 308 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 EVI5O60447 810 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms