RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 SLC17A8Q8NDX2 589 aa14.68□□□□□ -0.06
COL4A1-201ENST00000375820 THAP9Q9H5L6 903 aa14.68□□□□□ -0.06
COL4A1-201ENST00000375820 ANGPTL2Q9UKU9 493 aa14.68□□□□□ -0.06
COL4A1-201ENST00000375820 SNAP23O00161 211 aa14.68□□□□□ -0.06
COL4A1-201ENST00000375820 GH2P01242 217 aa14.68□□□□□ -0.06
COL4A1-201ENST00000375820 SUPT20HL1Q3ZLR7 823 aa14.68□□□□□ -0.06
COL4A1-201ENST00000375820 ZC3H12BQ5HYM0 836 aaKnown RBP14.68□□□□□ -0.06
COL4A1-201ENST00000375820 SLC13A1Q9BZW2 595 aa14.68□□□□□ -0.06
COL4A1-201ENST00000375820 TMEM260Q9NX78 707 aa14.68□□□□□ -0.06
COL4A1-201ENST00000375820 L3MBTL1Q9Y468 752 aa14.68□□□□□ -0.06
COL4A1-201ENST00000375820 SLC16A4O15374 487 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 MMEP08473 750 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 HSPA6P17066 643 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 RWDD2BP57060 319 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 AP1B1Q10567 949 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 TMEM270Q6UE05 265 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 VSTM4Q8IW00 320 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 GTPBP10A4D1E9 387 aaKnown RBP14.67□□□□□ -0.06
COL4A1-201ENST00000375820 C21orf2O43822 256 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 RBBP7Q16576 425 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 MDH1BQ5I0G3 518 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 EXOC8Q8IYI6 725 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 PDIK1LQ8N165 341 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 NLGN1Q8N2Q7 840 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 SYT2Q8N9I0 419 aaPredicted RBP14.67□□□□□ -0.06
COL4A1-201ENST00000375820 TEKT2Q9UIF3 430 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 SYCE1LA8MT33 242 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 LRRC14Q15048 493 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 TAF1BQ53T94 588 aaPredicted RBP14.67□□□□□ -0.06
COL4A1-201ENST00000375820 ALKBH5Q6P6C2 394 aaKnown RBP14.67□□□□□ -0.06
COL4A1-201ENST00000375820 ZNF513Q8N8E2 541 aaPredicted RBP14.67□□□□□ -0.06
COL4A1-201ENST00000375820 RFWD2Q8NHY2 731 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 CYP4F11Q9HBI6 524 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 NUP153P49790 1475 aaKnown RBP14.67□□□□□ -0.06
COL4A1-201ENST00000375820 hCG_2014768A0A024R1R8 64 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 ZSCAN9O15535 394 aaPredicted RBP14.67□□□□□ -0.06
COL4A1-201ENST00000375820 ADORA2BP29275 332 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 RASSF3Q86WH2 238 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 RASA4BC9J798 803 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 RASA4O43374 803 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 SOX11P35716 441 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 SERPINI1Q99574 410 aa14.67□□□□□ -0.06
COL4A1-201ENST00000375820 UPF3AQ9H1J1 476 aaKnown RBP14.67□□□□□ -0.06
COL4A1-201ENST00000375820 CFAP69A5D8W1 941 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 MAPK13O15264 365 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 DNAJC6O75061 913 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 CATSPER3Q86XQ3 398 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 SPATS2LQ9NUQ6 558 aaKnown RBP14.66□□□□□ -0.06
COL4A1-201ENST00000375820 CNOT8Q9UFF9 292 aaKnown RBP14.66□□□□□ -0.06
COL4A1-201ENST00000375820 TAC1P20366 129 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 SRRM1Q8IYB3 904 aaKnown RBP14.66□□□□□ -0.06
COL4A1-201ENST00000375820 GIPC2Q8TF65 315 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 SLC10A4Q96EP9 437 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 DACH2Q96NX9 599 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 ALG13Q9NP73 1137 aaKnown RBP14.66□□□□□ -0.06
COL4A1-201ENST00000375820 KIF17Q9P2E2 1029 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 PI4KBQ9UBF8 816 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 MYOM2P54296 1465 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 STAT3P40763 770 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 FLOT2Q14254 428 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 ENOX1Q8TC92 643 aaKnown RBP14.66□□□□□ -0.06
COL4A1-201ENST00000375820 ADAM22Q9P0K1 906 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 ESYT3A0FGR9 886 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 GYG2O15488 501 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 CCNE1P24864 410 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 ZBED6P86452 979 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 TWF2Q6IBS0 349 aaKnown RBP14.66□□□□□ -0.06
COL4A1-201ENST00000375820 RHPN2Q8IUC4 686 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 EPC1Q9H2F5 836 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 SRPRBQ9Y5M8 271 aaKnown RBP14.66□□□□□ -0.06
COL4A1-201ENST00000375820 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.66□□□□□ -0.06
COL4A1-201ENST00000375820 USP17L15C9J2P7 530 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 USP17L13C9JLJ4 530 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 USP17L11C9JVI0 530 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 USP17L18D6R9N7 530 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 USP17L22D6RA61 530 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 USP17L17D6RBQ6 530 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 USP17L19D6RCP7 530 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 USP17L20D6RJB6 530 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 DIAPH2O60879 1101 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 MCF2P10911 925 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 USP17L24Q0WX57 530 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 USP17L6PQ6QN14 398 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 SFR1Q86XK3 245 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 FLAD1Q8NFF5 587 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 TTLL11Q8NHH1 800 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 ZBTB18Q99592 522 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 C11orf70Q9BRQ4 267 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 SUN2Q9UH99 717 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 PNMA6FA0A0J9YX94 578 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 UBA6A0AVT1 1052 aaPredicted RBP14.66□□□□□ -0.06
COL4A1-201ENST00000375820 E9PMD0 336 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 CIAO1O76071 339 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 ZNF667Q5HYK9 610 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 TAGAPQ8N103 731 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 KLC2Q9H0B6 622 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 ADA2Q9NZK5 511 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 SCINQ9Y6U3 715 aa14.66□□□□□ -0.06
COL4A1-201ENST00000375820 IKBKBO14920 756 aa14.65□□□□□ -0.06
COL4A1-201ENST00000375820 SASH1O94885 1247 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms