RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ZNF449Q6P9G9 518 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 PARP9Q8IXQ6 854 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 ANKS1AQ92625 1134 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 THOC1Q96FV9 657 aaKnown RBP18.1■□□□□ 0.49
VARS-215ENST00000375663 H0YCG3 227 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 PPEF1O14829 653 aaPredicted RBP18.1■□□□□ 0.49
VARS-215ENST00000375663 TRIM49P0CI25 452 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 TRIM49CP0CI26 452 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 CHRNA3P32297 505 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 YWHAGP61981 247 aaKnown RBP eCLIP18.1■□□□□ 0.49
VARS-215ENST00000375663 RASA3Q14644 834 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 TTBK2Q6IQ55 1244 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 CDAN1Q8IWY9 1227 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 NARFQ9UHQ1 456 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 NPHP3-ACAD11A0A0J9YXS1 232 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 STAM2O75886 525 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 NAB2Q15742 525 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 PKN1Q16512 942 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 SRRM1Q8IYB3 904 aaKnown RBP18.1■□□□□ 0.49
VARS-215ENST00000375663 ARL8AQ96BM9 186 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 GOLPH3Q9H4A6 298 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 DBNDD1Q9H9R9 158 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 KMT5AQ9NQR1 393 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 ANAPC7Q9UJX3 599 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 POLR2BP30876 1174 aaKnown RBP18.09■□□□□ 0.49
VARS-215ENST00000375663 EZH2Q15910 746 aaKnown RBP18.09■□□□□ 0.49
VARS-215ENST00000375663 CCHCR1Q8TD31 782 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 MRPL47Q9HD33 250 aaKnown RBP18.09■□□□□ 0.49
VARS-215ENST00000375663 KBTBD4Q9NVX7 518 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 A0A087X0B3 334 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 FAM237AA0A1B0GTK4 181 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 RPS6KA4O75676 772 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 INHBAP08476 426 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 PSMC4P43686 418 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 FAM182BQ5T319 152 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 BSPRYQ5W0U4 402 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 ATP2A3Q93084 1043 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 PICK1Q9NRD5 415 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 CNOT8Q9UFF9 292 aaKnown RBP18.09■□□□□ 0.49
VARS-215ENST00000375663 SPATA31D1Q6ZQQ2 1576 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 SORBS3O60504 671 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 AKR1B1P15121 316 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 GALCP54803 685 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 BYSLQ13895 437 aaKnown RBP18.09■□□□□ 0.49
VARS-215ENST00000375663 LRRC14Q15048 493 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 ANKFY1Q9P2R3 1169 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 RNF8O76064 485 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 SLC9A1P19634 815 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 CACNB3P54284 484 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 USP38Q8NB14 1042 aa18.09■□□□□ 0.49
VARS-215ENST00000375663 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.08■□□□□ 0.49
VARS-215ENST00000375663 FAM196BA6NMK8 535 aa18.08■□□□□ 0.49
VARS-215ENST00000375663 SOX5P35711 763 aa18.08■□□□□ 0.49
VARS-215ENST00000375663 SF3B3Q15393 1217 aaKnown RBP18.08■□□□□ 0.49
VARS-215ENST00000375663 FIGNQ5HY92 759 aa18.08■□□□□ 0.49
VARS-215ENST00000375663 CCDC137Q6PK04 289 aaKnown RBP18.08■□□□□ 0.49
VARS-215ENST00000375663 RPUSD2Q8IZ73 545 aaKnown RBP18.08■□□□□ 0.49
VARS-215ENST00000375663 SLC17A8Q8NDX2 589 aa18.08■□□□□ 0.49
VARS-215ENST00000375663 TRIM51Q9BSJ1 452 aa18.08■□□□□ 0.49
VARS-215ENST00000375663 TMOD4Q9NZQ9 345 aa18.08■□□□□ 0.49
VARS-215ENST00000375663 PDXKO00764 312 aa18.08■□□□□ 0.48
VARS-215ENST00000375663 MDM2Q00987 491 aaPredicted RBP18.08■□□□□ 0.48
VARS-215ENST00000375663 MYO1EQ12965 1108 aa18.08■□□□□ 0.48
VARS-215ENST00000375663 DRP2Q13474 957 aa18.08■□□□□ 0.48
VARS-215ENST00000375663 LRIG3Q6UXM1 1119 aa18.08■□□□□ 0.48
VARS-215ENST00000375663 TRPC6Q9Y210 931 aa18.08■□□□□ 0.48
VARS-215ENST00000375663 PHF20L1A8MW92 1017 aa18.08■□□□□ 0.48
VARS-215ENST00000375663 NOP56O00567 594 aaKnown RBP18.08■□□□□ 0.48
VARS-215ENST00000375663 BRAFP15056 766 aa18.08■□□□□ 0.48
VARS-215ENST00000375663 PDE6BP35913 854 aa18.08■□□□□ 0.48
VARS-215ENST00000375663 YWHAEP62258 255 aaKnown RBP18.08■□□□□ 0.48
VARS-215ENST00000375663 RNASELQ05823 741 aaKnown RBP18.08■□□□□ 0.48
VARS-215ENST00000375663 GNPTABQ3T906 1256 aa18.08■□□□□ 0.48
VARS-215ENST00000375663 BRDTQ58F21 947 aaPredicted RBP18.08■□□□□ 0.48
VARS-215ENST00000375663 WDR91A4D1P6 747 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 MAP2K7O14733 419 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 SCYL2Q6P3W7 929 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 RNF207Q6ZRF8 634 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 XXYLT1Q8NBI6 393 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 KDM6AO15550 1401 aaPredicted RBP18.07■□□□□ 0.48
VARS-215ENST00000375663 RASA4BC9J798 803 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 RASA4O43374 803 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 KRT1P04264 644 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 USP11P51784 963 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 PEX3P56589 373 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 DHX34Q14147 1143 aaKnown RBP18.07■□□□□ 0.48
VARS-215ENST00000375663 NCAPGQ9BPX3 1015 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 HEMGNQ9BXL5 484 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 INTS2Q9H0H0 1204 aaKnown RBP18.07■□□□□ 0.48
VARS-215ENST00000375663 A0A087X0T9 212 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 TCRBV5S4A2TA0A5A2 114 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 FAM107AO95990 144 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 FAM228BP0C875 321 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 PRLRP16471 622 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 PMS1P54277 932 aaKnown RBP18.07■□□□□ 0.48
VARS-215ENST00000375663 GRM1Q13255 1194 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 PPP2R5DQ14738 602 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 PDCD7Q8N8D1 485 aaKnown RBP18.07■□□□□ 0.48
VARS-215ENST00000375663 CEP170P1Q96L14 293 aa18.07■□□□□ 0.48
VARS-215ENST00000375663 STK10O94804 968 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms