RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 PCDHA12Q9UN75 941 aa13.32□□□□□ -0.28
RAP1A-202ENST00000369709 XRCC4Q13426 336 aa13.32□□□□□ -0.28
RAP1A-202ENST00000369709 JAMLQ86YT9 394 aa13.32□□□□□ -0.28
RAP1A-202ENST00000369709 GLYCTKQ8IVS8 523 aa13.32□□□□□ -0.28
RAP1A-202ENST00000369709 SUPT20HQ8NEM7 779 aa13.32□□□□□ -0.28
RAP1A-202ENST00000369709 NPHS2Q9NP85 383 aa13.32□□□□□ -0.28
RAP1A-202ENST00000369709 DNM3Q9UQ16 869 aa13.32□□□□□ -0.28
RAP1A-202ENST00000369709 CEP170BQ9Y4F5 1589 aaPredicted RBP13.31□□□□□ -0.28
RAP1A-202ENST00000369709 MROH5Q6ZUA9 1318 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 WDR17Q8IZU2 1322 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 DNAJC6O75061 913 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 ATP9AO75110 1047 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 SERPINB3P29508 390 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 TTI2Q6NXR4 508 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 MIS18BP1Q6P0N0 1132 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 TMC3Q7Z5M5 1100 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 ARHGAP18Q8N392 663 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 MAIP1Q8WWC4 291 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 TCHPQ9BT92 498 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 SMYD3Q9H7B4 428 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 KIF20BQ96Q89 1820 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 FAM237AA0A1B0GTK4 181 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 TPP2P29144 1249 aaPredicted RBP13.31□□□□□ -0.28
RAP1A-202ENST00000369709 VHLP40337 213 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 PFKFB3Q16875 520 aaPredicted RBP13.31□□□□□ -0.28
RAP1A-202ENST00000369709 EAPPQ56P03 285 aaPredicted RBP13.31□□□□□ -0.28
RAP1A-202ENST00000369709 MEI1Q5TIA1 1274 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 CRELD2Q6UXH1 353 aaPredicted RBP13.31□□□□□ -0.28
RAP1A-202ENST00000369709 CD302Q8IX05 232 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 SRBD1Q8N5C6 995 aaKnown RBP13.31□□□□□ -0.28
RAP1A-202ENST00000369709 EPB41L4AQ9HCS5 686 aaPredicted RBP13.31□□□□□ -0.28
RAP1A-202ENST00000369709 ZCCHC11Q5TAX3 1644 aaKnown RBP13.31□□□□□ -0.28
RAP1A-202ENST00000369709 SHBGP04278 402 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 KRT16P08779 473 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 MEA1Q16626 185 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 C1orf146Q5VVC0 180 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 CTAGE3PQ8IX95 158 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 ZBTB38Q8NAP3 1195 aaPredicted RBP13.31□□□□□ -0.28
RAP1A-202ENST00000369709 C1orf54Q8WWF1 131 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 FAXDC2Q96IV6 333 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 ANLNQ9NQW6 1124 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 TFCP2L1Q9NZI6 479 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 USP11P51784 963 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 CACNA2D1P54289 1103 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 PTK2Q05397 1052 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 TMEM132AQ24JP5 1023 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 RGS9BPQ6ZS82 235 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 KIAA0825Q8IV33 1275 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 PALM2Q8IXS6 379 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 MED15Q96RN5 788 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 TMEM165Q9HC07 324 aa13.31□□□□□ -0.28
RAP1A-202ENST00000369709 DDX25Q9UHL0 483 aaKnown RBP13.31□□□□□ -0.28
RAP1A-202ENST00000369709 MEIS1O00470 390 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 ATF7P17544 494 aaPredicted RBP13.3□□□□□ -0.28
RAP1A-202ENST00000369709 RNASELQ05823 741 aaKnown RBP13.3□□□□□ -0.28
RAP1A-202ENST00000369709 DNAJC3Q13217 504 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 CNBD1Q8NA66 436 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 CARD9Q9H257 536 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 CASQ2O14958 399 aaPredicted RBP13.3□□□□□ -0.28
RAP1A-202ENST00000369709 PABPC4Q13310 644 aaKnown RBP eCLIP13.3□□□□□ -0.285e-6■■■■■ 40.4
RAP1A-202ENST00000369709 HSP90AA5PQ58FG0 334 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 CCDC110Q8TBZ0 833 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 ERP44Q9BS26 406 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 PABPC3Q9H361 631 aaKnown RBP13.3□□□□□ -0.28
RAP1A-202ENST00000369709 NDE1Q9NXR1 346 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 UTYO14607 1347 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 FAM187AA6NFU0 413 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 MARK3P27448 753 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 FLT3P36888 993 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 USP40Q9NVE5 1235 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 NOL3O60936 208 aaKnown RBP13.3□□□□□ -0.28
RAP1A-202ENST00000369709 JDP2Q8WYK2 163 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 ZBTB21Q9ULJ3 1066 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 AGTPBP1Q9UPW5 1226 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 ZNF148Q9UQR1 794 aa13.3□□□□□ -0.28
RAP1A-202ENST00000369709 NIP7Q9Y221 180 aaKnown RBP eCLIP13.3□□□□□ -0.28
RAP1A-202ENST00000369709 PITPNM2Q9BZ72 1349 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 SETD1BQ9UPS6 1966 aaKnown RBP13.29□□□□□ -0.28
RAP1A-202ENST00000369709 DPPA5A6NC42 116 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 CAPN9O14815 690 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 ROR2Q01974 943 aaKnown RBP13.29□□□□□ -0.28
RAP1A-202ENST00000369709 SAYSD1Q9NPB0 183 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 FRMPD1Q5SYB0 1578 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 CDC42BPGQ6DT37 1551 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 LRRC10BA6NIK2 292 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 MGRN1O60291 552 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 PCCAP05165 728 aaPredicted RBP13.29□□□□□ -0.28
RAP1A-202ENST00000369709 TNFRSF8P28908 595 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 CYP4A11Q02928 519 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 COASYQ13057 564 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 DNAJC10Q8IXB1 793 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 C4orf33Q8N1A6 199 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 SLC35G2Q8TBE7 412 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 MAGEC3Q8TD91 643 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 CCT6BQ92526 530 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 OLFM3Q96PB7 478 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.29□□□□□ -0.28
RAP1A-202ENST00000369709 KITP10721 976 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 KCNJ1P48048 391 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 RPS6KA3P51812 740 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms