RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 RAD23BP54727 409 aa17.52■□□□□ 0.4
CHD1L-203ENST00000369259 NPEPPSP55786 919 aa17.52■□□□□ 0.4
CHD1L-203ENST00000369259 ZC3H12AQ5D1E8 599 aaKnown RBP17.52■□□□□ 0.4
CHD1L-203ENST00000369259 SAMD1Q6SPF0 538 aaPredicted RBP17.52■□□□□ 0.4
CHD1L-203ENST00000369259 KRT28Q7Z3Y7 464 aa17.52■□□□□ 0.4
CHD1L-203ENST00000369259 UTP4Q969X6 686 aaKnown RBP17.52■□□□□ 0.4
CHD1L-203ENST00000369259 PIDD1Q9HB75 910 aa17.52■□□□□ 0.4
CHD1L-203ENST00000369259 ETNK1Q9HBU6 452 aa17.52■□□□□ 0.4
CHD1L-203ENST00000369259 WDR35Q9P2L0 1181 aa17.52■□□□□ 0.4
CHD1L-203ENST00000369259 DBR1Q9UK59 544 aaKnown RBP17.52■□□□□ 0.4
CHD1L-203ENST00000369259 AMFRQ9UKV5 643 aa17.52■□□□□ 0.4
CHD1L-203ENST00000369259 RREB1Q92766 1687 aa17.52■□□□□ 0.39
CHD1L-203ENST00000369259 ERVV-2B6SEH9 535 aa17.52■□□□□ 0.39
CHD1L-203ENST00000369259 MAP3K13O43283 966 aa17.52■□□□□ 0.39
CHD1L-203ENST00000369259 PDHA1P08559 390 aa17.52■□□□□ 0.39
CHD1L-203ENST00000369259 ADAM9Q13443 819 aa17.52■□□□□ 0.39
CHD1L-203ENST00000369259 DHX34Q14147 1143 aaKnown RBP17.52■□□□□ 0.39
CHD1L-203ENST00000369259 PPP1R15BQ5SWA1 713 aa17.52■□□□□ 0.39
CHD1L-203ENST00000369259 EXOC3L1Q86VI1 746 aa17.52■□□□□ 0.39
CHD1L-203ENST00000369259 UHMK1Q8TAS1 419 aaKnown RBP17.52■□□□□ 0.39
CHD1L-203ENST00000369259 MGARPQ8TDB4 240 aa17.52■□□□□ 0.39
CHD1L-203ENST00000369259 ZMYND8Q9ULU4 1186 aaPredicted RBP17.52■□□□□ 0.39
CHD1L-203ENST00000369259 ARAP2Q8WZ64 1704 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 ATP8B3O60423 1300 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 KIAA0391O15091 583 aaKnown RBP17.51■□□□□ 0.39
CHD1L-203ENST00000369259 H2AFZP0C0S5 128 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 MARSP56192 900 aaKnown RBP17.51■□□□□ 0.39
CHD1L-203ENST00000369259 DYNLL1P63167 89 aaKnown RBP17.51■□□□□ 0.39
CHD1L-203ENST00000369259 PARP6Q2NL67 630 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 H2AFVQ71UI9 128 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 HEATR3Q7Z4Q2 680 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 APBB1IPQ7Z5R6 666 aaPredicted RBP17.51■□□□□ 0.39
CHD1L-203ENST00000369259 JAMLQ86YT9 394 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 RPUSD2Q8IZ73 545 aaKnown RBP17.51■□□□□ 0.39
CHD1L-203ENST00000369259 PIGOQ8TEQ8 1089 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 STK32AQ8WU08 396 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 GLG1Q92896 1179 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 RMDN2Q96LZ7 410 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 KANSL2Q9H9L4 492 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 CYP39A1Q9NYL5 469 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 DIS3Q9Y2L1 958 aaKnown RBP17.51■□□□□ 0.39
CHD1L-203ENST00000369259 UBR2Q8IWV8 1755 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 USP17L12C9JPN9 530 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 USP17L21D6R901 530 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 MYBL1P10243 752 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 PEX5P50542 639 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 LMNB2Q03252 620 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 KLC1Q07866 573 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 UBAP2Q5T6F2 1119 aaKnown RBP17.51■□□□□ 0.39
CHD1L-203ENST00000369259 MFSD5Q6N075 450 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 EZH1Q92800 747 aaPredicted RBP17.51■□□□□ 0.39
CHD1L-203ENST00000369259 PNMA5Q96PV4 448 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 NAP1L3Q99457 506 aaPredicted RBP17.51■□□□□ 0.39
CHD1L-203ENST00000369259 BARHL2Q9NY43 387 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 ABCF2Q9UG63 623 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 TRMT112Q9UI30 125 aaKnown RBP17.51■□□□□ 0.39
CHD1L-203ENST00000369259 RASAL2Q9UJF2 1139 aa17.51■□□□□ 0.39
CHD1L-203ENST00000369259 PEX11AO75192 247 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 RNF8O76064 485 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 TPBGLP0DKB5 382 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 ACADSP16219 412 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 EPS15P42566 896 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 CCDC15Q0P6D6 951 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 RNF43Q68DV7 783 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 TMEM154Q6P9G4 183 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 BARGINQ6ZT62 677 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 SLC17A8Q8NDX2 589 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 DDX12PQ92771 950 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 BORCS6Q96GS4 357 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 CDK5RAP3Q96JB5 506 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 TXLNGQ9NUQ3 528 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 KLHL14Q9P2G3 628 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 CTNNAL1Q9UBT7 734 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 NENFQ9UMX5 172 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 ANXA13P27216 316 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 COPB2P35606 906 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 PRPF4BQ13523 1007 aaKnown RBP17.5■□□□□ 0.39
CHD1L-203ENST00000369259 KRT25Q7Z3Z0 450 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 CKAP2Q8WWK9 683 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 GRHL1Q9NZI5 618 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 MTRF1LQ9UGC7 380 aaKnown RBP17.5■□□□□ 0.39
CHD1L-203ENST00000369259 INTUQ9ULD6 942 aa17.5■□□□□ 0.39
CHD1L-203ENST00000369259 TMEM120BA0PK00 339 aa17.49■□□□□ 0.39
CHD1L-203ENST00000369259 RIPK2O43353 540 aa17.49■□□□□ 0.39
CHD1L-203ENST00000369259 SP100P23497 879 aaPredicted RBP17.49■□□□□ 0.39
CHD1L-203ENST00000369259 MAPK7Q13164 816 aa17.49■□□□□ 0.39
CHD1L-203ENST00000369259 NONOQ15233 471 aaKnown RBP eCLIP17.49■□□□□ 0.39
CHD1L-203ENST00000369259 TSNAXIP1Q2TAA8 658 aa17.49■□□□□ 0.39
CHD1L-203ENST00000369259 CCDC152Q4G0S7 254 aa17.49■□□□□ 0.39
CHD1L-203ENST00000369259 RAD54LQ92698 747 aa17.49■□□□□ 0.39
CHD1L-203ENST00000369259 RPS6KC1Q96S38 1066 aa17.49■□□□□ 0.39
CHD1L-203ENST00000369259 EPAS1Q99814 870 aa17.49■□□□□ 0.39
CHD1L-203ENST00000369259 GORASP1Q9BQQ3 440 aa17.49■□□□□ 0.39
CHD1L-203ENST00000369259 TRIM4Q9C037 500 aa17.49■□□□□ 0.39
CHD1L-203ENST00000369259 LRRC27Q9C0I9 530 aa17.49■□□□□ 0.39
CHD1L-203ENST00000369259 ERVK-5Q9HDB9 667 aa17.49■□□□□ 0.39
CHD1L-203ENST00000369259 PCDH11XQ9BZA7 1347 aa17.49■□□□□ 0.39
CHD1L-203ENST00000369259 DDX3YO15523 660 aaKnown RBP17.48■□□□□ 0.39
CHD1L-203ENST00000369259 BAG3O95817 575 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 ACTN1P12814 892 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms