RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.67□□□□□ -0.38
H3F3A-203ENST00000366815 RPAINQ86UA6 219 aa12.67□□□□□ -0.38
H3F3A-203ENST00000366815 PPM1EQ8WY54 764 aa12.67□□□□□ -0.38
H3F3A-203ENST00000366815 ZMYND12Q9H0C1 365 aa12.67□□□□□ -0.38
H3F3A-203ENST00000366815 SMARCAD1Q9H4L7 1026 aa12.67□□□□□ -0.38
H3F3A-203ENST00000366815 CERS4Q9HA82 394 aa12.67□□□□□ -0.38
H3F3A-203ENST00000366815 AGO4Q9HCK5 861 aaKnown RBP12.67□□□□□ -0.38
H3F3A-203ENST00000366815 ERAP1Q9NZ08 941 aa12.67□□□□□ -0.38
H3F3A-203ENST00000366815 SLC9A2Q9UBY0 812 aa12.67□□□□□ -0.38
H3F3A-203ENST00000366815 PRPF3O43395 683 aaKnown RBP12.66□□□□□ -0.38
H3F3A-203ENST00000366815 MARK3P27448 753 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 PSMA5P28066 241 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 ACTR2P61160 394 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 PPFIA1Q13136 1202 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 CCDC85BQ15834 202 aaPredicted RBP12.66□□□□□ -0.38
H3F3A-203ENST00000366815 GRIK4Q16099 956 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 TAF2Q6P1X5 1199 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 RUFY4Q6ZNE9 571 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 NIPA1Q7RTP0 329 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 LRRN4Q8WUT4 740 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 ARNTL2Q8WYA1 636 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 GLG1Q92896 1179 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 RAD9AQ99638 391 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 MTCH2Q9Y6C9 303 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 COL4A6Q14031 1691 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 TTC28Q96AY4 2481 aa12.66□□□□□ -0.38
H3F3A-203ENST00000366815 WDR81Q562E7 1941 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 LOXHD1Q8IVV2 1947 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 IGLV3-22A0A075B6J6 115 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 FAM86B1E9PN63 330 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 LPXNO60711 386 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 ATG7O95352 703 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 CHRNA1P02708 482 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 CYP3A4P08684 503 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 FAM86B2P0C5J1 330 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 PDIA3P30101 505 aaKnown RBP12.65□□□□□ -0.38
H3F3A-203ENST00000366815 WNT7BP56706 349 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 MGAT3Q09327 533 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 TOB2Q14106 344 aaPredicted RBP12.65□□□□□ -0.38
H3F3A-203ENST00000366815 JAKMIP3Q5VZ66 844 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 RUFY3Q7L099 469 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 SEPT8Q92599 483 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 PHKBQ93100 1093 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 SDF4Q9BRK5 362 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 RNF26Q9BY78 433 aaPredicted RBP12.65□□□□□ -0.38
H3F3A-203ENST00000366815 MAP10Q9P2G4 905 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 THEGQ9P2T0 379 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 TUBE1Q9UJT0 475 aa12.65□□□□□ -0.38
H3F3A-203ENST00000366815 SPTBN5Q9NRC6 3674 aaKnown RBP12.65□□□□□ -0.38
H3F3A-203ENST00000366815 IGKV6D-21A0A0A0MT36 114 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.64□□□□□ -0.39
H3F3A-203ENST00000366815 LINC01553A4QN01 128 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 DHX15O43143 795 aaKnown RBP12.64□□□□□ -0.39
H3F3A-203ENST00000366815 CCNE2O96020 404 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 AMHP03971 560 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 INSRRP14616 1297 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 IFNAR1P17181 557 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 ERVK-21P61565 698 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 HTRA4P83105 476 aaPredicted RBP12.64□□□□□ -0.39
H3F3A-203ENST00000366815 SKOR1P84550 965 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 GRB10Q13322 594 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 KRT40Q6A162 431 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 MCTP2Q6DN12 878 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 FAM117BQ6P1L5 589 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 PLPPR4Q7Z2D5 763 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 MYOCDQ8IZQ8 938 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 REXO1Q8N1G1 1221 aaKnown RBP12.64□□□□□ -0.39
H3F3A-203ENST00000366815 CCDC12Q8WUD4 166 aaPredicted RBP12.64□□□□□ -0.39
H3F3A-203ENST00000366815 ATXN2LQ8WWM7 1075 aaKnown RBP12.64□□□□□ -0.39
H3F3A-203ENST00000366815 NCOA5Q9HCD5 579 aaKnown RBP12.64□□□□□ -0.39
H3F3A-203ENST00000366815 C6orf50Q9HD87 102 aa12.64□□□□□ -0.39
H3F3A-203ENST00000366815 NLRC5Q86WI3 1866 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 RRN3P2A6NIE6 340 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 PPFIA3O75145 1194 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 NEFLP07196 543 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 ZNF76P36508 570 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 STAT5BP51692 787 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 CCT2P78371 535 aaKnown RBP12.63□□□□□ -0.39
H3F3A-203ENST00000366815 PLCB4Q15147 1175 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 ABHD15Q6UXT9 468 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 PLA2G4DQ86XP0 818 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 MICALL1Q8N3F8 863 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 DNAJB3Q8WWF6 145 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 APBB2Q92870 758 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 TOP1MTQ969P6 601 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 ZBTB10Q96DT7 871 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 IFIH1Q9BYX4 1025 aaKnown RBP12.63□□□□□ -0.39
H3F3A-203ENST00000366815 TM6SF1Q9BZW5 370 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 AZI2Q9H6S1 392 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 ATP13A2Q9NQ11 1180 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 INSL6Q9Y581 213 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 RALGAPA2Q2PPJ7 1873 aa12.63□□□□□ -0.39
H3F3A-203ENST00000366815 MYH9P35579 1960 aaKnown RBP12.63□□□□□ -0.39
H3F3A-203ENST00000366815 IPO5O00410 1097 aaKnown RBP12.62□□□□□ -0.39
H3F3A-203ENST00000366815 EDIL3O43854 480 aa12.62□□□□□ -0.39
H3F3A-203ENST00000366815 GHRP10912 638 aa12.62□□□□□ -0.39
H3F3A-203ENST00000366815 GNA11P29992 359 aa12.62□□□□□ -0.39
H3F3A-203ENST00000366815 IGBP1P78318 339 aa12.62□□□□□ -0.39
H3F3A-203ENST00000366815 AKAP17AQ02040 695 aaKnown RBP12.62□□□□□ -0.39
H3F3A-203ENST00000366815 LPIN1Q14693 890 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms