RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 PRKCQQ04759 706 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 SCRN1Q12765 414 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 TCEA2Q15560 299 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 TKFCQ3LXA3 575 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 CREG2Q8IUH2 290 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 SYNPOQ8N3V7 929 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 FCRL3Q96P31 734 aaPredicted RBP9.63□□□□□ -0.87
YBX3-204ENST00000366290 EYA3Q99504 573 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 KRTAP4-8Q9BYQ9 185 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 PCDHA11Q9Y5I1 949 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 A0A1B0GUL6 1792 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 SSU72P8A0A1W2PR75 194 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 AURKAO14965 403 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 PPP1R12AO14974 1030 aaPredicted RBP9.62□□□□□ -0.87
YBX3-204ENST00000366290 ESR1P03372 595 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 SCG5P05408 212 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 ECI1P42126 302 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 SUMO1P63165 101 aaKnown RBP9.62□□□□□ -0.87
YBX3-204ENST00000366290 CYP4F3Q08477 520 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 TNIP1Q15025 636 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 CIAPIN1Q6FI81 312 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 ATF7IPQ6VMQ6 1270 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 RNF111Q6ZNA4 994 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 ASB11Q8WXH4 323 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 KCTD13Q8WZ19 329 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 ARHGAP45Q92619 1136 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 MISP3Q96FF7 219 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 KAZALD1Q96I82 304 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 FEZ1Q99689 392 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 GPRC5DQ9NZD1 345 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 VAV3Q9UKW4 847 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.62□□□□□ -0.87
YBX3-204ENST00000366290 BACE2Q9Y5Z0 518 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 MED23Q9ULK4 1368 aa9.62□□□□□ -0.87
YBX3-204ENST00000366290 RASSF10A6NK89 507 aa9.61□□□□□ -0.87
YBX3-204ENST00000366290 UFL1O94874 794 aa9.61□□□□□ -0.87
YBX3-204ENST00000366290 CPP00450 1065 aa9.61□□□□□ -0.87
YBX3-204ENST00000366290 NBPF7P0C2Y1 421 aaPredicted RBP9.61□□□□□ -0.87
YBX3-204ENST00000366290 IGHMBP2P38935 993 aaKnown RBP9.61□□□□□ -0.87
YBX3-204ENST00000366290 MAP4K2Q12851 820 aa9.61□□□□□ -0.87
YBX3-204ENST00000366290 PRSS53Q2L4Q9 553 aa9.61□□□□□ -0.87
YBX3-204ENST00000366290 RABL6Q3YEC7 729 aaPredicted RBP9.61□□□□□ -0.87
YBX3-204ENST00000366290 EPHA10Q5JZY3 1008 aa9.61□□□□□ -0.87
YBX3-204ENST00000366290 RTP2Q5QGT7 225 aa9.61□□□□□ -0.87
YBX3-204ENST00000366290 USP50Q70EL3 339 aaPredicted RBP9.61□□□□□ -0.87
YBX3-204ENST00000366290 CNTROBQ8N137 903 aa9.61□□□□□ -0.87
YBX3-204ENST00000366290 TMEM145Q8NBT3 493 aa9.61□□□□□ -0.87
YBX3-204ENST00000366290 DPF2Q92785 391 aa9.61□□□□□ -0.87
YBX3-204ENST00000366290 C9orf78Q9NZ63 289 aaPredicted RBP9.61□□□□□ -0.87
YBX3-204ENST00000366290 ZNF646O15015 1829 aaPredicted RBP9.61□□□□□ -0.87
YBX3-204ENST00000366290 ANKRD18BA2A2Z9 1011 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 C2orf71A6NGG8 1288 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 PLIN1O60240 522 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 ECE2O60344 883 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 FKTNO75072 461 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 GSTM1P09488 218 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 RPS12P25398 132 aaKnown RBP9.6□□□□□ -0.87
YBX3-204ENST00000366290 EPS15P42566 896 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 CCT4P50991 539 aaKnown RBP9.6□□□□□ -0.87
YBX3-204ENST00000366290 EGR3Q06889 387 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 IFIT5Q13325 482 aaKnown RBP9.6□□□□□ -0.87
YBX3-204ENST00000366290 ZKSCAN2Q63HK3 967 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 SLC4A10Q6U841 1118 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 LMBR1LQ6UX01 489 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 FRAT1Q92837 279 aaPredicted RBP9.6□□□□□ -0.87
YBX3-204ENST00000366290 COPS5Q92905 334 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 C1orf159Q96HA4 380 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 API5Q9BZZ5 524 aaKnown RBP9.6□□□□□ -0.87
YBX3-204ENST00000366290 ANKRD2Q9GZV1 360 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 USP44Q9H0E7 712 aa9.6□□□□□ -0.87
YBX3-204ENST00000366290 NCOA5Q9HCD5 579 aaKnown RBP9.6□□□□□ -0.87
YBX3-204ENST00000366290 IRS2Q9Y4H2 1338 aa9.59□□□□□ -0.87
YBX3-204ENST00000366290 DNAJC25-GNG10A0A024R161 153 aa9.59□□□□□ -0.87
YBX3-204ENST00000366290 PSMD14O00487 310 aa9.59□□□□□ -0.87
YBX3-204ENST00000366290 IPO8O15397 1037 aaKnown RBP9.59□□□□□ -0.87
YBX3-204ENST00000366290 RAD17O75943 681 aa9.59□□□□□ -0.87
YBX3-204ENST00000366290 VIL1P09327 827 aaKnown RBP9.59□□□□□ -0.87
YBX3-204ENST00000366290 SEPHS1P49903 392 aa9.59□□□□□ -0.87
YBX3-204ENST00000366290 GMPSP49915 693 aaPredicted RBP9.59□□□□□ -0.87
YBX3-204ENST00000366290 TEKQ02763 1124 aa9.59□□□□□ -0.87
YBX3-204ENST00000366290 SLC35F1Q5T1Q4 408 aa9.59□□□□□ -0.87
YBX3-204ENST00000366290 CST9Q5W186 159 aa9.59□□□□□ -0.87
YBX3-204ENST00000366290 RCSD1Q6JBY9 416 aa9.59□□□□□ -0.87
YBX3-204ENST00000366290 C15orf52Q6ZUT6 534 aaKnown RBP9.59□□□□□ -0.87
YBX3-204ENST00000366290 MPHOSPH8Q99549 860 aa9.59□□□□□ -0.87
YBX3-204ENST00000366290 SLKQ9H2G2 1235 aaPredicted RBP9.59□□□□□ -0.87
YBX3-204ENST00000366290 DBNDD1Q9H9R9 158 aa9.59□□□□□ -0.87
YBX3-204ENST00000366290 ADARB2Q9NS39 739 aaKnown RBP9.59□□□□□ -0.87
YBX3-204ENST00000366290 AP5S1Q9NUS5 200 aa9.59□□□□□ -0.87
YBX3-204ENST00000366290 PGAP2Q9UHJ9 254 aa9.59□□□□□ -0.87
YBX3-204ENST00000366290 WTIPA6NIX2 430 aaPredicted RBP9.58□□□□□ -0.88
YBX3-204ENST00000366290 THBDP07204 575 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 CD96P40200 585 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 LBX1P52954 281 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 RRP1P56182 461 aaKnown RBP9.58□□□□□ -0.88
YBX3-204ENST00000366290 CHRNDQ07001 517 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 BNIP3Q12983 259 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 IKZF1Q13422 519 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 CBX2Q14781 532 aaPredicted RBP9.58□□□□□ -0.88
YBX3-204ENST00000366290 CCDC57Q2TAC2 916 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms