RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 RAPGEF5Q92565 580 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 SNF8Q96H20 258 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 KIFC3Q9BVG8 833 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 DPH5Q9H2P9 285 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 AZI2Q9H6S1 392 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 ANKFY1Q9P2R3 1169 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 TTC26A0AVF1 554 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 IQCA1LA6NCM1 817 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 RHOBTB3O94955 611 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 SERPINB10P48595 397 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 PARP10Q53GL7 1025 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 CCDC80Q76M96 950 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 SCYL3Q8IZE3 742 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 GALNT15Q8N3T1 639 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 GIMAP8Q8ND71 665 aaPredicted RBP7.06□□□□□ -1.28
TRIM38-201ENST00000357085 CEP70Q8NHQ1 597 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 LSM14BQ9BX40 385 aaKnown RBP7.06□□□□□ -1.28
TRIM38-201ENST00000357085 SLC52A2Q9HAB3 445 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 ST3GAL1Q11201 340 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 ITGB3BPQ13352 177 aaPredicted RBP7.06□□□□□ -1.28
TRIM38-201ENST00000357085 ZNF174Q15697 407 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 ACCSLQ4AC99 568 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 C11orf63Q6NUN7 778 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 PCGF5Q86SE9 256 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 LRMDAQ9H2I8 198 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 MAGEB6P1A0A0J9YX57 407 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 GTPBP10A4D1E9 387 aaKnown RBP7.05□□□□□ -1.28
TRIM38-201ENST00000357085 FAM47DPA6NHR8 397 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 CBFA2T3O75081 653 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 ITGA9Q13797 1035 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 SLC18A3Q16572 532 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 CALCRLQ16602 461 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 TCERG1LQ5VWI1 586 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 ZNF790Q6PG37 636 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 RFFLQ8WZ73 363 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 PRMT1Q99873 361 aaKnown RBP7.05□□□□□ -1.28
TRIM38-201ENST00000357085 FRMD8P1Q9BZ68 369 aaPredicted RBP7.05□□□□□ -1.28
TRIM38-201ENST00000357085 WNT8AQ9H1J5 351 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 CCDC87Q9NVE4 849 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 AFF2P51816 1311 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 KIF28PB7ZC32 967 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 ADCY7P51828 1080 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 AP1B1Q10567 949 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 CWF19L2Q2TBE0 894 aaKnown RBP7.05□□□□□ -1.28
TRIM38-201ENST00000357085 LMBR1LQ6UX01 489 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 XAGE2Q96GT9 111 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 MLXIPQ9HAP2 919 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 MCM9Q9NXL9 1143 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 MTO1Q9Y2Z2 717 aaKnown RBP7.05□□□□□ -1.28
TRIM38-201ENST00000357085 ARFGEF2Q9Y6D5 1785 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 hCG_2014768A0A024R1R8 64 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 FOXO3O43524 673 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 E2F6O75461 281 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 SPIDRQ14159 915 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 RABL6Q3YEC7 729 aaPredicted RBP7.05□□□□□ -1.28
TRIM38-201ENST00000357085 PDXDC1Q6P996 788 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.05□□□□□ -1.28
TRIM38-201ENST00000357085 BRIP1Q9BX63 1249 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 PLA2G12BQ9BX93 195 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 LEMD3Q9Y2U8 911 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 ZNF233A6NK53 670 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 CCDC166P0CW27 439 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 PDE6AP16499 860 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 ATP6V1C1P21283 382 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 HSD17B3P37058 310 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 FXR1P51114 621 aaKnown RBP eCLIP7.05□□□□□ -1.28
TRIM38-201ENST00000357085 MDM2Q00987 491 aaPredicted RBP7.05□□□□□ -1.28
TRIM38-201ENST00000357085 PPARAQ07869 468 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 ANO5Q75V66 913 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 ADSSL1Q8N142 457 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 WHRNQ9P202 907 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 H3BNX3 289 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 AOC3Q16853 763 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 TRIM15Q9C019 465 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 SQORQ9Y6N5 450 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 ADD1P35611 737 aaKnown RBP7.05□□□□□ -1.28
TRIM38-201ENST00000357085 RBM5P52756 815 aaKnown RBP eCLIP7.05□□□□□ -1.28
TRIM38-201ENST00000357085 INAQ16352 499 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 RBM12BQ8IXT5 1001 aaKnown RBP7.05□□□□□ -1.28
TRIM38-201ENST00000357085 DBNDD2Q9BQY9 259 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 CCDC134Q9H6E4 229 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 PMS2P54278 862 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 ERVK-24P63145 666 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 POP5Q969H6 163 aaKnown RBP7.05□□□□□ -1.28
TRIM38-201ENST00000357085 C8orf4Q9NR00 106 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 SLC12A4Q9UP95 1085 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 AP4S1Q9Y587 144 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 IQANK1A0A1B0GTG1 560 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 SPDYE3A6NKU9 549 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 FGAP02671 866 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 MAGEA8P43361 318 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 KIF2BQ8N4N8 673 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 IMPG2Q9BZV3 1241 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 TBX22Q9Y458 520 aa7.05□□□□□ -1.28
TRIM38-201ENST00000357085 TSPY2A6NKD2 308 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 FTCDO95954 541 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 TNFAIP3P21580 790 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 SERPINB3P29508 390 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 TTKP33981 857 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 OLFML2BQ68BL8 750 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms