RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 NDUFA8P51970 172 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 RGS9BPQ6ZS82 235 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 FLAD1Q8NFF5 587 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 OR9Q1Q8NGQ5 310 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 TTC7AQ9ULT0 858 aaPredicted RBP18.42■□□□□ 0.54
COL27A1-201ENST00000356083 USP14P54578 494 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 KRT77Q7Z794 578 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 FANCBQ8NB91 859 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 RNF103-CHMP3A0A140T963 221 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 PSAPP07602 524 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 RHPN2Q8IUC4 686 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 TRIM11Q96F44 468 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 BZW1Q7L1Q6 419 aaKnown RBP18.42■□□□□ 0.54
COL27A1-201ENST00000356083 APPL2Q8NEU8 664 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 PPARGC1AQ9UBK2 798 aaKnown RBP18.42■□□□□ 0.54
COL27A1-201ENST00000356083 SEC24DO94855 1032 aaPredicted RBP18.42■□□□□ 0.54
COL27A1-201ENST00000356083 CHRNDQ07001 517 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 TCP1P17987 556 aaKnown RBP18.42■□□□□ 0.54
COL27A1-201ENST00000356083 SH3BGRP55822 239 aaPredicted RBP18.42■□□□□ 0.54
COL27A1-201ENST00000356083 UBE2SQ16763 222 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 ANKRD40Q6AI12 368 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 DDX28Q9NUL7 540 aaKnown RBP18.42■□□□□ 0.54
COL27A1-201ENST00000356083 GRIK1P39086 918 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 NCOA1Q15788 1441 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 PIGOQ8TEQ8 1089 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 SCG3Q8WXD2 468 aaKnown RBP18.41■□□□□ 0.54
COL27A1-201ENST00000356083 MAN1C1Q9NR34 630 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 BABAM1Q9NWV8 329 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 CLIC4Q9Y696 253 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 PNMA6EA0A0J9YXQ4 647 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 FAM47DPA6NHR8 397 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 HUS1O60921 280 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 SLFN14P0C7P3 912 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 COPS2P61201 443 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 PARVGQ9HBI0 331 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 KRT4P19013 534 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 ACAD11Q709F0 780 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 ARHGAP26Q9UNA1 814 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 HOXD10P28358 340 aa18.41■□□□□ 0.54
COL27A1-201ENST00000356083 hCG_2014768A0A024R1R8 64 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 BMP3P12645 472 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 ME3Q16798 604 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 ZNF772Q68DY9 489 aaPredicted RBP18.4■□□□□ 0.54
COL27A1-201ENST00000356083 ZNF229Q9UJW7 825 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 PPP2R2CQ9Y2T4 447 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 ALDH1A1P00352 501 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 PCYT1AP49585 367 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 MRPS15P82914 257 aaKnown RBP18.4■□□□□ 0.54
COL27A1-201ENST00000356083 ALFQ53S48 1182 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 CENPTQ96BT3 561 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 UNC45AQ9H3U1 944 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.4■□□□□ 0.54
COL27A1-201ENST00000356083 GTF2A1LQ9UNN4 478 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 PDHA1P08559 390 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 SMARCA1P28370 1054 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 TIAM1Q13009 1591 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 ZFYVE1Q9HBF4 777 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 SPATS2LQ9NUQ6 558 aaKnown RBP18.4■□□□□ 0.54
COL27A1-201ENST00000356083 ANGPTL2Q9UKU9 493 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 VEPH1Q14D04 833 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 C10orf53Q8N6V4 93 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 BHMTQ93088 406 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 TJP2Q9UDY2 1190 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 CA4P22748 312 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 MRPS25P82663 173 aaKnown RBP18.4■□□□□ 0.54
COL27A1-201ENST00000356083 FSCBQ5H9T9 825 aa18.4■□□□□ 0.54
COL27A1-201ENST00000356083 CLDN3O15551 220 aa18.39■□□□□ 0.54
COL27A1-201ENST00000356083 CDC25AP30304 524 aa18.39■□□□□ 0.54
COL27A1-201ENST00000356083 AKT1P31749 480 aa18.39■□□□□ 0.54
COL27A1-201ENST00000356083 KCNJ6P48051 423 aa18.39■□□□□ 0.54
COL27A1-201ENST00000356083 GTF2H3Q13889 308 aa18.39■□□□□ 0.54
COL27A1-201ENST00000356083 CENPUQ71F23 418 aa18.39■□□□□ 0.54
COL27A1-201ENST00000356083 KIAA2013Q8IYS2 634 aa18.39■□□□□ 0.54
COL27A1-201ENST00000356083 CDHR1Q96JP9 859 aa18.39■□□□□ 0.54
COL27A1-201ENST00000356083 ZMYM6O95789 1325 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 NLRP9Q7RTR0 991 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 EIF4E1BA6NMX2 242 aaKnown RBP18.39■□□□□ 0.53
COL27A1-201ENST00000356083 H0Y3Z8 333 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 TJP3O95049 919 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 TRPC1P48995 793 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 ZNF568Q3ZCX4 644 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 SIX5Q8N196 739 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 FMO2Q99518 471 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 SMARCAD1Q9H4L7 1026 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 CYP4F11Q9HBI6 524 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 TADA3O75528 432 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 TBCKQ8TEA7 893 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.39■□□□□ 0.532e-7■■■■■ 79.5
COL27A1-201ENST00000356083 EXOC4Q96A65 974 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 MTBPQ96DY7 904 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 UHRF1BP1LA0JNW5 1464 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 DENND4BO75064 1496 aaPredicted RBP18.39■□□□□ 0.53
COL27A1-201ENST00000356083 SERPINB2P05120 415 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 HMBSP08397 361 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 USPL1Q5W0Q7 1092 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 SYDE2Q5VT97 1194 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 TRIM8Q9BZR9 551 aa18.39■□□□□ 0.53
COL27A1-201ENST00000356083 C14orf93Q9H972 538 aaKnown RBP18.39■□□□□ 0.53
COL27A1-201ENST00000356083 GYG2O15488 501 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 CTTNQ14247 550 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms