RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 PEAK1Q9H792 1746 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 SNX16P57768 344 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 TRPC3Q13507 836 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 SEC23AQ15436 765 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 DEPTORQ8TB45 409 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 ZNF473Q8WTR7 871 aaKnown RBP15.91■□□□□ 0.14
NUP50-201ENST00000347635 NT5C1BQ96P26 610 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 PCIF1Q9H4Z3 704 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 TMEM206Q9H813 350 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 FAM217BQ9NTX9 383 aaPredicted RBP15.91■□□□□ 0.14
NUP50-201ENST00000347635 SNX24Q9Y343 169 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 MYMKA6NI61 221 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 MAPK4P31152 587 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 NSFP46459 744 aaKnown RBP15.91■□□□□ 0.14
NUP50-201ENST00000347635 R3HDM1Q15032 1099 aaKnown RBP15.91■□□□□ 0.14
NUP50-201ENST00000347635 LRIG3Q6UXM1 1119 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 MIGA2Q7L4E1 593 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.91■□□□□ 0.14
NUP50-201ENST00000347635 KLHL29Q96CT2 875 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 ZIM3Q96PE6 472 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 VCXQ9H320 206 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 PMS2P54278 862 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 PKN1Q16512 942 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 XKR9Q5GH70 373 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 ANKRD20A3Q5VUR7 823 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 N4BP2L2Q92802 583 aaPredicted RBP15.91■□□□□ 0.14
NUP50-201ENST00000347635 INTS13Q9NVM9 706 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 LUC7L3O95232 432 aaKnown RBP15.9■□□□□ 0.14
NUP50-201ENST00000347635 DLATP10515 647 aaKnown RBP15.9■□□□□ 0.14
NUP50-201ENST00000347635 EZH2Q15910 746 aaKnown RBP15.9■□□□□ 0.14
NUP50-201ENST00000347635 TBC1D10BQ4KMP7 808 aaPredicted RBP15.9■□□□□ 0.14
NUP50-201ENST00000347635 LRRC8CQ8TDW0 803 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 ANAPC5Q9UJX4 755 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 MIF4GDA9UHW6 222 aaKnown RBP15.9■□□□□ 0.14
NUP50-201ENST00000347635 CCDC38Q502W7 563 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 TRIM68Q6AZZ1 485 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 DPP9Q86TI2 863 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 PPP1R12CQ9BZL4 782 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 I3L4J1 428 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 MYO1FO00160 1098 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 PLSCR1O15162 318 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 FGFR2P21802 821 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 COPB2P35606 906 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 UBXN2AP68543 259 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 CTTNQ14247 550 aaKnown RBP15.9■□□□□ 0.14
NUP50-201ENST00000347635 ELAC2Q9BQ52 826 aaKnown RBP15.9■□□□□ 0.14
NUP50-201ENST00000347635 IFNB1P01574 187 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 ATF7P17544 494 aaPredicted RBP15.9■□□□□ 0.14
NUP50-201ENST00000347635 MUM1Q2TAK8 710 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 CAPN12Q6ZSI9 719 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 HVCN1Q96D96 273 aa15.9■□□□□ 0.14
NUP50-201ENST00000347635 SFI1A8K8P3 1242 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 PLEKP08567 350 aaPredicted RBP15.89■□□□□ 0.13
NUP50-201ENST00000347635 TGFB2P61812 414 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 DMP1Q13316 513 aaPredicted RBP15.89■□□□□ 0.13
NUP50-201ENST00000347635 FRMD5Q7Z6J6 570 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 DAGLBQ8NCG7 672 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 TRIM6Q9C030 488 aaPredicted RBP15.89■□□□□ 0.13
NUP50-201ENST00000347635 TXNDC16Q9P2K2 825 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 AKAP12Q02952 1782 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 FAM208AQ9UK61 1670 aaKnown RBP15.89■□□□□ 0.13
NUP50-201ENST00000347635 KRT14P02533 472 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 TMOD1P28289 359 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 GCKP35557 465 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 TRIM11Q96F44 468 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 FMN2Q9NZ56 1722 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 A0A087X0B3 334 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 POTEFA5A3E0 1075 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 USP17L15C9J2P7 530 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 USP17L13C9JLJ4 530 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 USP17L11C9JVI0 530 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 USP17L18D6R9N7 530 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 USP17L22D6RA61 530 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 USP17L17D6RBQ6 530 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 USP17L19D6RCP7 530 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 USP17L20D6RJB6 530 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 POTEIP0CG38 1075 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 CDK17Q00537 523 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 USP17L24Q0WX57 530 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 DRP2Q13474 957 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 NAB2Q15742 525 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 USP17L6PQ6QN14 398 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 POTEGQ6S5H5 508 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 POTEEQ6S8J3 1075 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 PPP1R21Q6ZMI0 780 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 PALM2Q8IXS6 379 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 PLAGL2Q9UPG8 496 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 SLC8A3P57103 927 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 LMNB2Q03252 620 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 ADCY1Q08828 1119 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 PPP2R5AQ15172 486 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 FBXW10Q5XX13 1052 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 RSBN1LQ6PCB5 846 aaPredicted RBP15.89■□□□□ 0.13
NUP50-201ENST00000347635 ADGRF4Q8IZF3 695 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 CALR3Q96L12 384 aaKnown RBP15.89■□□□□ 0.13
NUP50-201ENST00000347635 DAGLAQ9Y4D2 1042 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 DUSP10Q9Y6W6 482 aa15.89■□□□□ 0.13
NUP50-201ENST00000347635 USP17L10C9JJH3 530 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 MAP2K7O14733 419 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 BMP6P22004 513 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms