RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 GMCL1Q96IK5 515 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 TSG101Q99816 390 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 RAB34Q9BZG1 259 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 NT5C3AQ9H0P0 336 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 PCIF1Q9H4Z3 704 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 VIPAS39Q9H9C1 493 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 DNM3Q9UQ16 869 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 ATRNL1Q5VV63 1379 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 MYO1CO00159 1063 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 NFIBO00712 420 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 USO1O60763 962 aaKnown RBP6.61□□□□□ -1.35
CLCN3-201ENST00000347613 HEXIM1O94992 359 aaKnown RBP6.61□□□□□ -1.35
CLCN3-201ENST00000347613 MARCKSL1P49006 195 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 ATP1A2P50993 1020 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 IRAK1P51617 712 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 UGCGQ16739 394 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 TCERG1LQ5VWI1 586 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 B3GNT9Q6UX72 402 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 BTNL9Q6UXG8 535 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 TMEM179Q6ZVK1 233 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 SRLQ86TD4 932 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 C10orf67Q8IYJ2 551 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 TXLNBQ8N3L3 684 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 NOX5Q96PH1 765 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 DDX47Q9H0S4 455 aaKnown RBP6.61□□□□□ -1.35
CLCN3-201ENST00000347613 GPRC5CQ9NQ84 441 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 GCNT4Q9P109 453 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 G3V3G9 751 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 KCNK3O14649 394 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 AFPP02771 609 aaKnown RBP6.61□□□□□ -1.35
CLCN3-201ENST00000347613 ITGB3BPQ13352 177 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-201ENST00000347613 LLGL1Q15334 1064 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 EXOC3L4Q17RC7 722 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 EDRF1Q3B7T1 1238 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 DCAF8Q5TAQ9 597 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 NAA35Q5VZE5 725 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 ARHGEF19Q8IW93 802 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 USP38Q8NB14 1042 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 TPCN2Q8NHX9 752 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 GOLGA5Q8TBA6 731 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 CCDC17Q96LX7 622 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 TSGA10Q9BZW7 698 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 ARMCX3Q9UH62 379 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-201ENST00000347613 PITPNM2Q9BZ72 1349 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 KDM3AQ9Y4C1 1321 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 GOLGA6BA6NDN3 693 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 BHMG1C9JSJ3 638 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-201ENST00000347613 H0YGN5 161 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 BACH1O14867 736 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 CETN3O15182 167 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 DHX15O43143 795 aaKnown RBP6.61□□□□□ -1.35
CLCN3-201ENST00000347613 EVI5O60447 810 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 PEX10O60683 326 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 ATP9AO75110 1047 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 ALDH1B1P30837 517 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 CYP2J2P51589 502 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 ASIC2Q16515 512 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 BMT2Q1RMZ1 405 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 NBPF9Q3BBW0 867 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 ALKBH5Q6P6C2 394 aaKnown RBP6.61□□□□□ -1.35
CLCN3-201ENST00000347613 ZNF720Q7Z2F6 126 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 NLGN1Q8N2Q7 840 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 FBXO41Q8TF61 875 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 SCFD2Q8WU76 684 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 SYN2Q92777 582 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-201ENST00000347613 CCDC43Q96MW1 224 aaKnown RBP6.61□□□□□ -1.35
CLCN3-201ENST00000347613 POP1Q99575 1024 aaKnown RBP6.61□□□□□ -1.35
CLCN3-201ENST00000347613 STRA6Q9BX79 667 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 RSPH14Q9UHP6 348 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 RABGAP1Q9Y3P9 1069 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 SAMM50Q9Y512 469 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 NFS1Q9Y697 457 aa6.61□□□□□ -1.35
CLCN3-201ENST00000347613 TCRBV7S2A1N4TA0A589 114 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 SPDYE3A6NKU9 549 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 VGLL3A8MV65 326 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 FOXN3O00409 490 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-201ENST00000347613 SHOX2O60902 331 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-201ENST00000347613 IPO7O95373 1038 aaKnown RBP6.6□□□□□ -1.35
CLCN3-201ENST00000347613 PPP1R2P41236 205 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 GALCP54803 685 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 MRPS9P82933 396 aaKnown RBP6.6□□□□□ -1.35
CLCN3-201ENST00000347613 GUCY1A3Q02108 690 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 CKAP4Q07065 602 aaKnown RBP6.6□□□□□ -1.35
CLCN3-201ENST00000347613 PPP3CAQ08209 521 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 ZNF211Q13398 564 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-201ENST00000347613 FRMD5Q7Z6J6 570 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 MYCT1Q8N699 235 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 EHBP1Q8NDI1 1231 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 AFAP1L1Q8TED9 768 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 HOOK2Q96ED9 719 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 BTBD6Q96KE9 485 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 RNPC3Q96LT9 517 aaKnown RBP6.6□□□□□ -1.35
CLCN3-201ENST00000347613 KIFC3Q9BVG8 833 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.6□□□□□ -1.35
CLCN3-201ENST00000347613 ZNF277Q9NRM2 450 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-201ENST00000347613 AMACRQ9UHK6 382 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 SERPINA10Q9UK55 444 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 RRP15Q9Y3B9 282 aaKnown RBP6.6□□□□□ -1.35
CLCN3-201ENST00000347613 PDXKO00764 312 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 ATMINO43313 823 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms