RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 STOX1Q6ZVD7 989 aa19.35■□□□□ 0.69
SMC4-201ENST00000344722 RFFLQ8WZ73 363 aa19.35■□□□□ 0.69
SMC4-201ENST00000344722 RBM41Q96IZ5 413 aaKnown RBP19.35■□□□□ 0.69
SMC4-201ENST00000344722 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.35■□□□□ 0.697e-7■■■■□ 21.2
SMC4-201ENST00000344722 ALCAMQ13740 583 aa19.35■□□□□ 0.69
SMC4-201ENST00000344722 TEDDM1Q5T9Z0 273 aa19.35■□□□□ 0.69
SMC4-201ENST00000344722 ZBED4O75132 1171 aa19.35■□□□□ 0.69
SMC4-201ENST00000344722 PGM1P36871 562 aa19.35■□□□□ 0.69
SMC4-201ENST00000344722 TRMT10CQ7L0Y3 403 aaKnown RBP19.35■□□□□ 0.69
SMC4-201ENST00000344722 TRAPPC11Q7Z392 1133 aa19.35■□□□□ 0.69
SMC4-201ENST00000344722 ZNF711Q9Y462 761 aa19.35■□□□□ 0.69
SMC4-201ENST00000344722 MYO5CQ9NQX4 1742 aa19.35■□□□□ 0.69
SMC4-201ENST00000344722 UGGT1Q9NYU2 1555 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 BTDP43251 543 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 PFASO15067 1338 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 KRT38O76015 456 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 PROCA1Q8NCQ7 364 aaPredicted RBP19.34■□□□□ 0.69
SMC4-201ENST00000344722 TTLL11Q8NHH1 800 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 THRAP3Q9Y2W1 955 aaKnown RBP19.34■□□□□ 0.69
SMC4-201ENST00000344722 USP6P35125 1406 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 LRRC7Q96NW7 1537 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 RASSF3Q86WH2 238 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 CATSPER1Q8NEC5 780 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 PCIF1Q9H4Z3 704 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 SMYD2Q9NRG4 433 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 TLK1Q9UKI8 766 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 TOM1O60784 492 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 KRT10P13645 584 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 FGFR4P22455 802 aa19.34■□□□□ 0.69
SMC4-201ENST00000344722 CARSP49589 748 aaKnown RBP19.34■□□□□ 0.69
SMC4-201ENST00000344722 IGF2BP3O00425 579 aaKnown RBP eCLIP19.33■□□□□ 0.69
SMC4-201ENST00000344722 ANXA13P27216 316 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 KCTD6Q8NC69 237 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 WDR11Q9BZH6 1224 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 LCMT1Q9UIC8 334 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 SMG5Q9UPR3 1016 aaKnown RBP19.33■□□□□ 0.69
SMC4-201ENST00000344722 A0A1W2PQJ5 194 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 H7C1W4 665 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 MEIS1O00470 390 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 GNGT2O14610 69 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 SLC18A3Q16572 532 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 PACS2Q86VP3 889 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 ADSSL1Q8N142 457 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 HNRNPDLO14979 420 aaKnown RBP19.33■□□□□ 0.69
SMC4-201ENST00000344722 COASYQ13057 564 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 MED21Q13503 144 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 ITIH4Q14624 930 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 ZYXQ15942 572 aaKnown RBP19.33■□□□□ 0.69
SMC4-201ENST00000344722 DAB2IPQ5VWQ8 1189 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 DGKHQ86XP1 1220 aa19.33■□□□□ 0.69
SMC4-201ENST00000344722 TMEM191BP0C7N4 346 aa19.33■□□□□ 0.68
SMC4-201ENST00000344722 ANAPC7Q9UJX3 599 aa19.33■□□□□ 0.68
SMC4-201ENST00000344722 MAP3K4Q9Y6R4 1608 aa19.33■□□□□ 0.68
SMC4-201ENST00000344722 ZRANB2O95218 330 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMC4-201ENST00000344722 HSPA4LO95757 839 aa19.33■□□□□ 0.68
SMC4-201ENST00000344722 MCAMP43121 646 aa19.33■□□□□ 0.68
SMC4-201ENST00000344722 YARSP54577 528 aaKnown RBP19.33■□□□□ 0.68
SMC4-201ENST00000344722 COPS2P61201 443 aa19.33■□□□□ 0.68
SMC4-201ENST00000344722 ALX1Q15699 326 aa19.33■□□□□ 0.68
SMC4-201ENST00000344722 RARS2Q5T160 578 aaKnown RBP19.33■□□□□ 0.68
SMC4-201ENST00000344722 SLFN13Q68D06 897 aa19.33■□□□□ 0.68
SMC4-201ENST00000344722 OR2W6PQ8NHA6 318 aa19.33■□□□□ 0.68
SMC4-201ENST00000344722 BRIP1Q9BX63 1249 aa19.33■□□□□ 0.68
SMC4-201ENST00000344722 CNOT8Q9UFF9 292 aaKnown RBP19.33■□□□□ 0.68
SMC4-201ENST00000344722 PALLDQ8WX93 1383 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 RAD51CO43502 376 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 EPHB1P54762 984 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 BRDTQ58F21 947 aaPredicted RBP19.32■□□□□ 0.68
SMC4-201ENST00000344722 HESX1Q9UBX0 185 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 PNPLA6Q8IY17 1366 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 NCAPHQ15003 741 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 MFSD14BQ5SR56 506 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 ANKRD40Q6AI12 368 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 NSMFQ6X4W1 530 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 SLC26A7Q8TE54 656 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 NUB1Q9Y5A7 615 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.32■□□□□ 0.688e-10■■■■□ 19.5
SMC4-201ENST00000344722 LPXNO60711 386 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 NR3C1P04150 777 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 INPP1P49441 399 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 PRPSAP1Q14558 356 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 RAB44Q7Z6P3 723 aaPredicted RBP19.32■□□□□ 0.68
SMC4-201ENST00000344722 CPXCR1Q8N123 301 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 NGLY1Q96IV0 654 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 KIFC3Q9BVG8 833 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 ROPN1BQ9BZX4 212 aaPredicted RBP19.32■□□□□ 0.68
SMC4-201ENST00000344722 ROPN1Q9HAT0 212 aaPredicted RBP19.32■□□□□ 0.68
SMC4-201ENST00000344722 MROH7-TTC4A0A0A0MT08 1334 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 GNPATO15228 680 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 SCTRP47872 440 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 CTCFP49711 727 aaPredicted RBP19.32■□□□□ 0.68
SMC4-201ENST00000344722 SYDE1Q6ZW31 735 aaPredicted RBP19.32■□□□□ 0.68
SMC4-201ENST00000344722 ZBTB8OSQ8IWT0 167 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 KIF9Q9HAQ2 790 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 ATP6V0A4Q9HBG4 840 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 PDP2Q9P2J9 529 aa19.32■□□□□ 0.68
SMC4-201ENST00000344722 TRIM59Q8IWR1 403 aa19.31■□□□□ 0.68
SMC4-201ENST00000344722 IQGAP3Q86VI3 1631 aa19.31■□□□□ 0.68
SMC4-201ENST00000344722 SCP2P22307 547 aa19.31■□□□□ 0.68
SMC4-201ENST00000344722 MARK3P27448 753 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms