RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
RPL28-201ENST00000344063 POTECB2RU33 542 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 NTSR2O95665 410 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 FGFR2P21802 821 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 YWHAEP62258 255 aaKnown RBP11.74□□□□□ -0.53
RPL28-201ENST00000344063 COG7P83436 770 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 IL9RQ01113 521 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 SEPT6Q14141 434 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 WDR93Q6P2C0 686 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 ZC3H18Q86VM9 953 aaKnown RBP11.74□□□□□ -0.53
RPL28-201ENST00000344063 CTAGE3PQ8IX95 158 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 SPICE1Q8N0Z3 855 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.74□□□□□ -0.532e-9■□□□□ 9.3
RPL28-201ENST00000344063 ETNK1Q9HBU6 452 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 CCPG1Q9ULG6 757 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 PHBP35232 272 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 NT5DC1Q5TFE4 455 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 CC2D2BQ6DHV5 1058 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 TRAPPC11Q7Z392 1133 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 POMGNT1Q8WZA1 660 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 ABTB1Q969K4 478 aaPredicted RBP11.74□□□□□ -0.53
RPL28-201ENST00000344063 UBE2TQ9NPD8 197 aaPredicted RBP11.74□□□□□ -0.53
RPL28-201ENST00000344063 CLEC11AQ9Y240 323 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 PODXLO00592 558 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 MAP2K7O14733 419 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 MYBL1P10243 752 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 STAT2P52630 851 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 ARHGAP4P98171 946 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 ADCY2Q08462 1091 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 TBC1D10BQ4KMP7 808 aaPredicted RBP11.73□□□□□ -0.53
RPL28-201ENST00000344063 SGO2Q562F6 1265 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 C6orf118Q5T5N4 469 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 TMEM179Q6ZVK1 233 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 RPUSD2Q8IZ73 545 aaKnown RBP11.73□□□□□ -0.53
RPL28-201ENST00000344063 TTC16Q8NEE8 873 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 FLAD1Q8NFF5 587 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 MYCBPAPQ8TBZ2 947 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 HDAC7Q8WUI4 952 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 GPR101Q96P66 508 aaPredicted RBP11.73□□□□□ -0.53
RPL28-201ENST00000344063 CSRNP1Q96S65 589 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 CYTH2Q99418 400 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 DNAJC12Q9UKB3 198 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 FAM237AA0A1B0GTK4 181 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 MAPK4P31152 587 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 SARSP49591 514 aaKnown RBP11.73□□□□□ -0.53
RPL28-201ENST00000344063 SEC23AQ15436 765 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 KAZNQ674X7 775 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 FBXO33Q7Z6M2 555 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 CALR3Q96L12 384 aaKnown RBP11.73□□□□□ -0.53
RPL28-201ENST00000344063 TMEM60Q9H2L4 133 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 SYNGAP1Q96PV0 1343 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 STXBP3O00186 592 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 USP11P51784 963 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 CCDC14Q49A88 953 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 LRRC23Q53EV4 343 aaPredicted RBP11.73□□□□□ -0.53
RPL28-201ENST00000344063 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.73□□□□□ -0.532e-8■■■□□ 17.5
RPL28-201ENST00000344063 SLITRK6Q9H5Y7 841 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 SIGLEC1Q9BZZ2 1709 aa11.73□□□□□ -0.53
RPL28-201ENST00000344063 USP17L15C9J2P7 530 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 USP17L13C9JLJ4 530 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 USP17L11C9JVI0 530 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 USP17L18D6R9N7 530 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 USP17L22D6RA61 530 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 USP17L17D6RBQ6 530 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 USP17L19D6RCP7 530 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 USP17L20D6RJB6 530 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 GDF11O95390 407 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 RANBP1P43487 201 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 USP17L24Q0WX57 530 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 SLC18A3Q16572 532 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 USP17L6PQ6QN14 398 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 NSMCE1Q8WV22 266 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 TMOD4Q9NZQ9 345 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 RAB21Q9UL25 225 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 ATF7P17544 494 aaPredicted RBP11.72□□□□□ -0.53
RPL28-201ENST00000344063 PAX7P23759 505 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 RAD23BP54727 409 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 ARHGEF16Q5VV41 709 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 CCHCR1Q8TD31 782 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 HOOK2Q96ED9 719 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 PITPNM3Q9BZ71 974 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 ZNF148Q9UQR1 794 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 CAPN6Q9Y6Q1 641 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 hCG_2014768A0A024R1R8 64 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 USP17L10C9JJH3 530 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 RAD51CO43502 376 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 FAM107AO95990 144 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 ANXA13P27216 316 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 PSMC4P43686 418 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 SNX16P57768 344 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 TBX2Q13207 712 aaPredicted RBP11.72□□□□□ -0.53
RPL28-201ENST00000344063 PPP1R2P3Q6NXS1 205 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 FRMD5Q7Z6J6 570 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 SRRM1Q8IYB3 904 aaKnown RBP11.72□□□□□ -0.53
RPL28-201ENST00000344063 DAGLBQ8NCG7 672 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 SGSM3Q96HU1 749 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 DNAJC7Q99615 494 aa11.72□□□□□ -0.53
RPL28-201ENST00000344063 ZSCAN5CA6NGD5 496 aaPredicted RBP11.72□□□□□ -0.53
RPL28-201ENST00000344063 TCP10L2B9ZVM9 353 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms