RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ZBED4O75132 1171 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 CHN1P15882 459 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 TPD52P55327 224 aaPredicted RBP15.96■□□□□ 0.15
RRP1B-201ENST00000340648 PAPD7Q5XG87 772 aaKnown RBP15.96■□□□□ 0.15
RRP1B-201ENST00000340648 CCDC137Q6PK04 289 aaKnown RBP15.96■□□□□ 0.15
RRP1B-201ENST00000340648 ETNK1Q9HBU6 452 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 SAYSD1Q9NPB0 183 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 USP17L10C9JJH3 530 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 SKIP12755 728 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 GCLMP48507 274 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 MAP7Q14244 749 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 GEN1Q17RS7 908 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 LRIG3Q6UXM1 1119 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 FBXO41Q8TF61 875 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 TGS1Q96RS0 853 aaKnown RBP15.96■□□□□ 0.15
RRP1B-201ENST00000340648 ANAPC7Q9UJX3 599 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 CHRNA3P32297 505 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 RFFLQ8WZ73 363 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 HAUS1Q96CS2 278 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 USH1CQ9Y6N9 552 aa15.96■□□□□ 0.15
RRP1B-201ENST00000340648 FAM187AA6NFU0 413 aa15.96■□□□□ 0.14
RRP1B-201ENST00000340648 TCP10L2B9ZVM9 353 aa15.96■□□□□ 0.14
RRP1B-201ENST00000340648 ZBTB5O15062 677 aa15.96■□□□□ 0.14
RRP1B-201ENST00000340648 FAM107AO95990 144 aa15.96■□□□□ 0.14
RRP1B-201ENST00000340648 PDHA1P08559 390 aa15.96■□□□□ 0.14
RRP1B-201ENST00000340648 ARHGEF16Q5VV41 709 aa15.96■□□□□ 0.14
RRP1B-201ENST00000340648 SMC1BQ8NDV3 1235 aa15.96■□□□□ 0.14
RRP1B-201ENST00000340648 CD248Q9HCU0 757 aa15.96■□□□□ 0.14
RRP1B-201ENST00000340648 H7C0C1 242 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 FTLP02792 175 aaPredicted RBP15.95■□□□□ 0.14
RRP1B-201ENST00000340648 MT-ND3P03897 115 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 TRIM49P0CI25 452 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 TRIM49CP0CI26 452 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 ATP5OP48047 213 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 CCPG1Q9ULG6 757 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 A0A0U1RQJ8 604 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 ORC2Q13416 577 aaPredicted RBP15.95■□□□□ 0.14
RRP1B-201ENST00000340648 ERGIC2Q96RQ1 377 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 SLC40A1Q9NP59 571 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 CNOT8Q9UFF9 292 aaKnown RBP15.95■□□□□ 0.14
RRP1B-201ENST00000340648 VIRMAQ69YN4 1812 aaKnown RBP15.95■□□□□ 0.14
RRP1B-201ENST00000340648 A0A0G2JND7 137 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 LRRIQ4A6NIV6 560 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 BMP3P12645 472 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 NT5C2P49902 561 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 SPARCL1Q14515 664 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 EPM2AIP1Q7L775 607 aaPredicted RBP15.95■□□□□ 0.14
RRP1B-201ENST00000340648 RFX6Q8HWS3 928 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 NSUN4Q96CB9 384 aaKnown RBP15.95■□□□□ 0.14
RRP1B-201ENST00000340648 SAAL1Q96ER3 474 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 NEURL4Q96JN8 1562 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 CFAP73A6NFT4 308 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 BASP1P80723 227 aaKnown RBP15.95■□□□□ 0.14
RRP1B-201ENST00000340648 SYDE2Q5VT97 1194 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 USP38Q8NB14 1042 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 SPDL1Q96EA4 605 aa15.95■□□□□ 0.14
RRP1B-201ENST00000340648 SPATA31A3Q5VYP0 1347 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 GOLGA8SH3BPF8 625 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 TOM1O60784 492 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 ESRRAP11474 423 aaPredicted RBP15.94■□□□□ 0.14
RRP1B-201ENST00000340648 ELF1P32519 619 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 BYSLQ13895 437 aaKnown RBP15.94■□□□□ 0.14
RRP1B-201ENST00000340648 BBS9Q3SYG4 887 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 TMED8Q6PL24 325 aaPredicted RBP15.94■□□□□ 0.14
RRP1B-201ENST00000340648 DDX23Q9BUQ8 820 aaKnown RBP15.94■□□□□ 0.14
RRP1B-201ENST00000340648 CELF4Q9BZC1 486 aaKnown RBP15.94■□□□□ 0.14
RRP1B-201ENST00000340648 DCTN3O75935 186 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 NAB2Q15742 525 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.94■□□□□ 0.14
RRP1B-201ENST00000340648 XPO6Q96QU8 1125 aaKnown RBP15.94■□□□□ 0.14
RRP1B-201ENST00000340648 TSC22D3Q99576 134 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 INTS2Q9H0H0 1204 aaKnown RBP15.94■□□□□ 0.14
RRP1B-201ENST00000340648 KMT5AQ9NQR1 393 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 PLAGL2Q9UPG8 496 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 TBC1D9BQ66K14 1250 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 CDAN1Q8IWY9 1227 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 CASKIN2Q8WXE0 1202 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 TCP11X1B4DZS4 312 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 CASQ2O14958 399 aaPredicted RBP15.94■□□□□ 0.14
RRP1B-201ENST00000340648 MAP3K7O43318 606 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 IRX4P78413 519 aa15.94■□□□□ 0.14
RRP1B-201ENST00000340648 RNF8O76064 485 aa15.93■□□□□ 0.14
RRP1B-201ENST00000340648 C12orf60Q5U649 245 aa15.93■□□□□ 0.14
RRP1B-201ENST00000340648 ZNF564Q8TBZ8 553 aaPredicted RBP15.93■□□□□ 0.14
RRP1B-201ENST00000340648 MRPL47Q9HD33 250 aaKnown RBP15.93■□□□□ 0.14
RRP1B-201ENST00000340648 SUFUQ9UMX1 484 aa15.93■□□□□ 0.14
RRP1B-201ENST00000340648 OVOS2A0A0G2JMS6 1433 aa15.93■□□□□ 0.14
RRP1B-201ENST00000340648 TROAPQ12815 778 aa15.93■□□□□ 0.14
RRP1B-201ENST00000340648 HP1BP3Q5SSJ5 553 aaPredicted RBP15.93■□□□□ 0.14
RRP1B-201ENST00000340648 C1orf54Q8WWF1 131 aa15.93■□□□□ 0.14
RRP1B-201ENST00000340648 MAML1Q92585 1016 aa15.93■□□□□ 0.14
RRP1B-201ENST00000340648 GINS2Q9Y248 185 aa15.93■□□□□ 0.14
RRP1B-201ENST00000340648 MYCNP04198 464 aaPredicted RBP15.93■□□□□ 0.14
RRP1B-201ENST00000340648 UCHL3P15374 230 aa15.93■□□□□ 0.14
RRP1B-201ENST00000340648 SOX5P35711 763 aa15.93■□□□□ 0.14
RRP1B-201ENST00000340648 SARSP49591 514 aaKnown RBP15.93■□□□□ 0.14
RRP1B-201ENST00000340648 GALCP54803 685 aa15.93■□□□□ 0.14
RRP1B-201ENST00000340648 DHX34Q14147 1143 aaKnown RBP15.93■□□□□ 0.14
RRP1B-201ENST00000340648 DLGAP5Q15398 846 aa15.93■□□□□ 0.14
RRP1B-201ENST00000340648 KIAA1755Q5JYT7 1200 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms