RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 BMP8AQ7Z5Y6 402 aa16.11■□□□□ 0.17
COMMD4-202ENST00000338995 CCDC60Q8IWA6 550 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-202ENST00000338995 PHF7Q9BWX1 381 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-202ENST00000338995 CDHR5Q9HBB8 845 aa16.11■□□□□ 0.17
COMMD4-202ENST00000338995 MAFBQ9Y5Q3 323 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-202ENST00000338995 ESYT2A0FGR8 921 aa16.1■□□□□ 0.17
COMMD4-202ENST00000338995 FAM86B1E9PN63 330 aa16.1■□□□□ 0.17
COMMD4-202ENST00000338995 DHX15O43143 795 aaKnown RBP16.1■□□□□ 0.17
COMMD4-202ENST00000338995 FAM86B2P0C5J1 330 aa16.1■□□□□ 0.17
COMMD4-202ENST00000338995 ATF7P17544 494 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-202ENST00000338995 METAP2P50579 478 aaKnown RBP eCLIP16.1■□□□□ 0.17
COMMD4-202ENST00000338995 COL9A3Q14050 684 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-202ENST00000338995 KIZQ2M2Z5 673 aa16.1■□□□□ 0.17
COMMD4-202ENST00000338995 TRMT1LQ7Z2T5 733 aaKnown RBP16.1■□□□□ 0.17
COMMD4-202ENST00000338995 SUGP1Q8IWZ8 645 aaKnown RBP16.1■□□□□ 0.17
COMMD4-202ENST00000338995 REXO1Q8N1G1 1221 aaKnown RBP16.1■□□□□ 0.17
COMMD4-202ENST00000338995 PBXIP1Q96AQ6 731 aa16.1■□□□□ 0.17
COMMD4-202ENST00000338995 TCEANC2Q96MN5 208 aa16.1■□□□□ 0.17
COMMD4-202ENST00000338995 OSMRQ99650 979 aa16.1■□□□□ 0.17
COMMD4-202ENST00000338995 ZMYND12Q9H0C1 365 aa16.1■□□□□ 0.17
COMMD4-202ENST00000338995 TMEM117Q9H0C3 514 aa16.1■□□□□ 0.17
COMMD4-202ENST00000338995 NGRNQ9NPE2 291 aaKnown RBP16.1■□□□□ 0.17
COMMD4-202ENST00000338995 LZTS1Q9Y250 596 aa16.1■□□□□ 0.17
COMMD4-202ENST00000338995 LOC730098B7Z3J9 87 aa16.09■□□□□ 0.17
COMMD4-202ENST00000338995 PER2O15055 1255 aa16.09■□□□□ 0.17
COMMD4-202ENST00000338995 MGEA5O60502 916 aa16.09■□□□□ 0.17
COMMD4-202ENST00000338995 C22orf31O95567 290 aa16.09■□□□□ 0.17
COMMD4-202ENST00000338995 ADD1P35611 737 aaKnown RBP16.09■□□□□ 0.17
COMMD4-202ENST00000338995 MRE11P49959 708 aa16.09■□□□□ 0.17
COMMD4-202ENST00000338995 CDC42EP1Q00587 391 aa16.09■□□□□ 0.17
COMMD4-202ENST00000338995 PLCB3Q01970 1234 aa16.09■□□□□ 0.17
COMMD4-202ENST00000338995 NHLH1Q02575 133 aa16.09■□□□□ 0.17
COMMD4-202ENST00000338995 EFCAB12Q6NXP0 572 aa16.09■□□□□ 0.17
COMMD4-202ENST00000338995 TRIM67Q6ZTA4 783 aa16.09■□□□□ 0.17
COMMD4-202ENST00000338995 COLGALT1Q8NBJ5 622 aa16.09■□□□□ 0.17
COMMD4-202ENST00000338995 GABBR1Q9UBS5 961 aa16.09■□□□□ 0.17
COMMD4-202ENST00000338995 BARX2Q9UMQ3 279 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-202ENST00000338995 AKT3Q9Y243 479 aa16.09■□□□□ 0.17
COMMD4-202ENST00000338995 USP15Q9Y4E8 981 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-202ENST00000338995 PIEZO1Q92508 2521 aa16.09■□□□□ 0.17
COMMD4-202ENST00000338995 IGLV3-22A0A075B6J6 115 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 TMEM221A6NGB7 291 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 M0R296 226 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 PRPF3O43395 683 aaKnown RBP16.08■□□□□ 0.16
COMMD4-202ENST00000338995 VTNP04004 478 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 ATP4AP20648 1035 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 CDC27P30260 824 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 PPM1AP35813 382 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 ZXDAP98168 799 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 CBX2Q14781 532 aaPredicted RBP16.08■□□□□ 0.16
COMMD4-202ENST00000338995 DUSP6Q16828 381 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 PRR16Q569H4 304 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 FAM228AQ86W67 206 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 CCDC148Q8NFR7 591 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 TMEM40Q8WWA1 233 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 MRPS27Q92552 414 aaKnown RBP16.08■□□□□ 0.16
COMMD4-202ENST00000338995 RPGRIP1Q96KN7 1286 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 ZNF558Q96NG5 402 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 PPP1R16BQ96T49 567 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 ENTPD7Q9NQZ7 604 aa16.08■□□□□ 0.16
COMMD4-202ENST00000338995 FAM217BQ9NTX9 383 aaPredicted RBP16.08■□□□□ 0.16
COMMD4-202ENST00000338995 CARNS1A5YM72 827 aa16.07■□□□□ 0.16
COMMD4-202ENST00000338995 WDR64B1ANS9 1081 aa16.07■□□□□ 0.16
COMMD4-202ENST00000338995 ZBTB42B2RXF5 422 aa16.07■□□□□ 0.16
COMMD4-202ENST00000338995 GPR32O75388 356 aa16.07■□□□□ 0.16
COMMD4-202ENST00000338995 HOXB8P17481 243 aaPredicted RBP16.07■□□□□ 0.16
COMMD4-202ENST00000338995 EIF4BP23588 611 aaKnown RBP16.07■□□□□ 0.16
COMMD4-202ENST00000338995 NLRP11P59045 1033 aaKnown RBP16.07■□□□□ 0.16
COMMD4-202ENST00000338995 ERVFC1P60507 584 aa16.07■□□□□ 0.16
COMMD4-202ENST00000338995 TMEM184AQ6ZMB5 413 aa16.07■□□□□ 0.16
COMMD4-202ENST00000338995 RASEFQ8IZ41 740 aa16.07■□□□□ 0.16
COMMD4-202ENST00000338995 TMEM87AQ8NBN3 555 aa16.07■□□□□ 0.16
COMMD4-202ENST00000338995 CRYGNQ8WXF5 182 aa16.07■□□□□ 0.16
COMMD4-202ENST00000338995 SCLT1Q96NL6 688 aa16.07■□□□□ 0.16
COMMD4-202ENST00000338995 SPG21Q9NZD8 308 aa16.07■□□□□ 0.16
COMMD4-202ENST00000338995 LOXHD1Q8IVV2 1947 aa16.07■□□□□ 0.16
COMMD4-202ENST00000338995 EVPLQ92817 2033 aa16.07■□□□□ 0.16
COMMD4-202ENST00000338995 CDC45O75419 566 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 GLP2RO95838 553 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 EOMESO95936 686 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 FGFR1P11362 822 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 SFNP31947 248 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 CIITAP33076 1130 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 TECP42680 631 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 USP11P51784 963 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 PTPN5P54829 565 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 DSC3Q14574 896 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 ADCK5Q3MIX3 580 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 BLOC1S2Q6QNY1 142 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 KCNT2Q6UVM3 1135 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 Q6ZUG5 572 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 TMC7Q7Z402 723 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 LRRC43Q8N309 656 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 RASGRP4Q8TDF6 673 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 TCF25Q9BQ70 676 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 C22orf23Q9BZE7 217 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 IRF2BPLQ9H1B7 796 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 CWH43Q9H720 699 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 DISC1Q9NRI5 854 aa16.06■□□□□ 0.16
COMMD4-202ENST00000338995 DACT1Q9NYF0 836 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms