RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 LGR5O75473 907 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 TRPA1O75762 1119 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 SOX10P56693 466 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 LRRC63Q05C16 580 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 KCNJ12Q14500 433 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 DUSP28Q4G0W2 176 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 ZC2HC1CQ53FD0 456 aaPredicted RBP16.22■□□□□ 0.19
CBX3-201ENST00000337620 PLPPR4Q7Z2D5 763 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 ZNF720Q7Z2F6 126 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 NOC3LQ8WTT2 800 aaKnown RBP16.22■□□□□ 0.19
CBX3-201ENST00000337620 AFG1LQ8WV93 481 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 NIFKQ9BYG3 293 aaKnown RBP16.22■□□□□ 0.19
CBX3-201ENST00000337620 THAP9Q9H5L6 903 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 PLS3P13797 630 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 CDC25BP30305 580 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 VEGFBP49765 207 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 POLGP54098 1239 aaPredicted RBP16.22■□□□□ 0.19
CBX3-201ENST00000337620 TNFAIP2Q03169 654 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 SPAG1Q07617 926 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 KNOP1Q1ED39 458 aaKnown RBP16.22■□□□□ 0.19
CBX3-201ENST00000337620 TCP11X2Q5H9J9 407 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 OLFML2BQ68BL8 750 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 IRF2BP1Q8IU81 584 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 ANKRD20A12PQ8NF67 263 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 FIZ1Q96SL8 496 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 KCTD10Q9H3F6 313 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 SMARCAD1Q9H4L7 1026 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 ATP6V0A4Q9HBG4 840 aa16.22■□□□□ 0.19
CBX3-201ENST00000337620 MAGEC2Q9UBF1 373 aaPredicted RBP16.22■□□□□ 0.19
CBX3-201ENST00000337620 PEX3P56589 373 aa16.21■□□□□ 0.19
CBX3-201ENST00000337620 KCNA1Q09470 495 aa16.21■□□□□ 0.19
CBX3-201ENST00000337620 STXBP4Q6ZWJ1 553 aa16.21■□□□□ 0.19
CBX3-201ENST00000337620 MCPH1Q8NEM0 835 aa16.21■□□□□ 0.19
CBX3-201ENST00000337620 OR6J1Q8NGC5 347 aa16.21■□□□□ 0.19
CBX3-201ENST00000337620 PPTC7Q8NI37 304 aa16.21■□□□□ 0.19
CBX3-201ENST00000337620 ZNF507Q8TCN5 953 aa16.21■□□□□ 0.19
CBX3-201ENST00000337620 FAM167AQ96KS9 214 aa16.21■□□□□ 0.19
CBX3-201ENST00000337620 CTAGE1Q96RT6 745 aa16.21■□□□□ 0.19
CBX3-201ENST00000337620 PDLIM7Q9NR12 457 aa16.21■□□□□ 0.19
CBX3-201ENST00000337620 PCDHB13Q9Y5F0 798 aa16.21■□□□□ 0.19
CBX3-201ENST00000337620 EMSYQ7Z589 1322 aa16.21■□□□□ 0.18
CBX3-201ENST00000337620 K7ENM7 598 aa16.21■□□□□ 0.18
CBX3-201ENST00000337620 EIF3DO15371 548 aaKnown RBP eCLIP16.21■□□□□ 0.18
CBX3-201ENST00000337620 TPM3P06753 285 aa16.21■□□□□ 0.18
CBX3-201ENST00000337620 HOXD13P35453 343 aa16.21■□□□□ 0.18
CBX3-201ENST00000337620 SP3Q02447 781 aa16.21■□□□□ 0.18
CBX3-201ENST00000337620 KRT31Q15323 416 aa16.21■□□□□ 0.18
CBX3-201ENST00000337620 ZCWPW2Q504Y3 356 aa16.21■□□□□ 0.18
CBX3-201ENST00000337620 KSR1Q8IVT5 923 aa16.21■□□□□ 0.18
CBX3-201ENST00000337620 KIFAP3Q92845 792 aa16.21■□□□□ 0.18
CBX3-201ENST00000337620 EMID1Q96A84 441 aaPredicted RBP16.21■□□□□ 0.18
CBX3-201ENST00000337620 GABRQQ9UN88 632 aa16.21■□□□□ 0.18
CBX3-201ENST00000337620 MGAMO43451 1857 aa16.21■□□□□ 0.18
CBX3-201ENST00000337620 NKRFO15226 690 aaKnown RBP eCLIP16.2■□□□□ 0.182e-11■□□□□ 8.6
CBX3-201ENST00000337620 ADCY6O43306 1168 aa16.2■□□□□ 0.18
CBX3-201ENST00000337620 FGFR1OPO95684 399 aaKnown RBP16.2■□□□□ 0.18
CBX3-201ENST00000337620 ZNF865P0CJ78 1059 aaPredicted RBP16.2■□□□□ 0.18
CBX3-201ENST00000337620 MAP2K2P36507 400 aa16.2■□□□□ 0.18
CBX3-201ENST00000337620 KIF22Q14807 665 aa16.2■□□□□ 0.18
CBX3-201ENST00000337620 EMC2Q15006 297 aa16.2■□□□□ 0.18
CBX3-201ENST00000337620 PLCB4Q15147 1175 aa16.2■□□□□ 0.18
CBX3-201ENST00000337620 BMT2Q1RMZ1 405 aa16.2■□□□□ 0.18
CBX3-201ENST00000337620 SLC7A3Q8WY07 619 aa16.2■□□□□ 0.18
CBX3-201ENST00000337620 BBXQ8WY36 941 aaPredicted RBP16.2■□□□□ 0.18
CBX3-201ENST00000337620 XPNPEP1Q9NQW7 623 aa16.2■□□□□ 0.18
CBX3-201ENST00000337620 RNF186Q9NXI6 227 aa16.2■□□□□ 0.18
CBX3-201ENST00000337620 LIMA1Q9UHB6 759 aaKnown RBP16.2■□□□□ 0.18
CBX3-201ENST00000337620 ARID2Q68CP9 1835 aa16.2■□□□□ 0.18
CBX3-201ENST00000337620 CCDC169A6NNP5 214 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 GOLGA6L6A8MZA4 724 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 DYNC1LI2O43237 492 aaPredicted RBP16.19■□□□□ 0.18
CBX3-201ENST00000337620 EEF1GP26641 437 aaKnown RBP16.19■□□□□ 0.18
CBX3-201ENST00000337620 FLT3LGP49771 235 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 FKBP3Q00688 224 aaKnown RBP16.19■□□□□ 0.18
CBX3-201ENST00000337620 PTPN21Q16825 1174 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 FILIP1LQ4L180 1135 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 APTXQ7Z2E3 356 aaKnown RBP16.19■□□□□ 0.18
CBX3-201ENST00000337620 FAM114A1Q8IWE2 563 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 ATP8B4Q8TF62 1192 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 CNOT6LQ96LI5 555 aaKnown RBP16.19■□□□□ 0.18
CBX3-201ENST00000337620 VPS16Q9H269 839 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 TAB2Q9NYJ8 693 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 NRBP1Q9UHY1 535 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 TRPC6Q9Y210 931 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 ZSWIM8A7E2V4 1837 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 SLC16A4O15374 487 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 LGALS2P05162 132 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 MAPTP10636 758 aaKnown RBP16.19■□□□□ 0.18
CBX3-201ENST00000337620 SLC26A2P50443 739 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 SMTNP53814 917 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 DMP1Q13316 513 aaPredicted RBP16.19■□□□□ 0.18
CBX3-201ENST00000337620 TARBP2Q15633 366 aaKnown RBP16.19■□□□□ 0.18
CBX3-201ENST00000337620 FOXR2Q6PJQ5 311 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 TMC6Q7Z403 805 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 TMEM143Q96AN5 459 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 POLR3FQ9H1D9 316 aaPredicted RBP16.19■□□□□ 0.18
CBX3-201ENST00000337620 DHX33Q9H6R0 707 aaKnown RBP16.19■□□□□ 0.18
CBX3-201ENST00000337620 INTS13Q9NVM9 706 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 ERAP1Q9NZ08 941 aa16.19■□□□□ 0.18
CBX3-201ENST00000337620 A0A1B0GTH6 734 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms