RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 RPTORQ8N122 1335 aa25.34■■□□□ 1.65
CLPTM1-201ENST00000337392 CCNE2O96020 404 aa25.33■■□□□ 1.65
CLPTM1-201ENST00000337392 CBWD6Q4V339 395 aa25.33■■□□□ 1.65
CLPTM1-201ENST00000337392 CBWD3Q5JTY5 395 aa25.33■■□□□ 1.65
CLPTM1-201ENST00000337392 CBWD5Q5RIA9 395 aa25.33■■□□□ 1.65
CLPTM1-201ENST00000337392 RNF207Q6ZRF8 634 aa25.33■■□□□ 1.65
CLPTM1-201ENST00000337392 KLRC1P26715 233 aa25.33■■□□□ 1.65
CLPTM1-201ENST00000337392 TRAF1Q13077 416 aa25.33■■□□□ 1.65
CLPTM1-201ENST00000337392 WHAMMP3Q1A5X7 153 aa25.33■■□□□ 1.65
CLPTM1-201ENST00000337392 PAPD7Q5XG87 772 aaKnown RBP25.33■■□□□ 1.65
CLPTM1-201ENST00000337392 LPAR1Q92633 364 aa25.33■■□□□ 1.65
CLPTM1-201ENST00000337392 ABCB6Q9NP58 842 aa25.33■■□□□ 1.65
CLPTM1-201ENST00000337392 GGA3Q9NZ52 723 aa25.33■■□□□ 1.65
CLPTM1-201ENST00000337392 EPB41P11171 864 aaKnown RBP25.33■■□□□ 1.64
CLPTM1-201ENST00000337392 DLG4P78352 724 aa25.33■■□□□ 1.64
CLPTM1-201ENST00000337392 BMT2Q1RMZ1 405 aa25.33■■□□□ 1.64
CLPTM1-201ENST00000337392 ZNF571Q7Z3V5 609 aaPredicted RBP25.33■■□□□ 1.64
CLPTM1-201ENST00000337392 FRMD5Q7Z6J6 570 aa25.33■■□□□ 1.64
CLPTM1-201ENST00000337392 FAM186BQ8IYM0 893 aa25.33■■□□□ 1.64
CLPTM1-201ENST00000337392 CAGE1Q8TC20 777 aa25.33■■□□□ 1.64
CLPTM1-201ENST00000337392 CNKSR2Q8WXI2 1034 aa25.33■■□□□ 1.64
CLPTM1-201ENST00000337392 SPAG5Q96R06 1193 aa25.33■■□□□ 1.64
CLPTM1-201ENST00000337392 VGLL3A8MV65 326 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 K7ENM7 598 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 PTPRAP18433 802 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 KLHDC7AQ5VTJ3 777 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 SNRNP48Q6IEG0 339 aaKnown RBP25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 FOXR2Q6PJQ5 311 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 AGPAT3Q9NRZ7 376 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 RNF146Q9NTX7 359 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 FAM53CQ9NYF3 392 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 BRCA1P38398 1863 aaKnown RBP25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 FTCDO95954 541 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 HIRAP54198 1017 aaPredicted RBP25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 BACE1P56817 501 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 LONRF2Q1L5Z9 754 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 MS4A14Q96JA4 679 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 FAM84AQ96KN4 292 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 SIX2Q9NPC8 291 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 FAM184BQ9ULE4 1060 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 UBIAD1Q9Y5Z9 338 aa25.32■■□□□ 1.64
CLPTM1-201ENST00000337392 POLR2AP24928 1970 aaKnown RBP25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 BACH1O14867 736 aa25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 POLR3GO15318 223 aaPredicted RBP25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 SERPING1P05155 500 aa25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 RNASE9P60153 205 aaKnown RBP25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 ARHGEF16Q5VV41 709 aa25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 SYCP3Q8IZU3 236 aa25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 PDCD2LQ9BRP1 358 aa25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 ARFGAP3Q9NP61 516 aa25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 FZD9O00144 591 aa25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 SLC26A4O43511 780 aa25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 LCA5LO95447 670 aa25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 BMS1Q14692 1282 aaKnown RBP25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 BORCS6Q96GS4 357 aa25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 RIT2Q99578 217 aa25.31■■□□□ 1.64
CLPTM1-201ENST00000337392 DOCK5Q9H7D0 1870 aa25.3■■□□□ 1.64
CLPTM1-201ENST00000337392 RARRES1P49788 294 aa25.3■■□□□ 1.64
CLPTM1-201ENST00000337392 ASIC2Q16515 512 aa25.3■■□□□ 1.64
CLPTM1-201ENST00000337392 PCNX4Q63HM2 1172 aa25.3■■□□□ 1.64
CLPTM1-201ENST00000337392 IRF2BP2Q7Z5L9 587 aa25.3■■□□□ 1.64
CLPTM1-201ENST00000337392 PXMP2Q9NR77 195 aa25.3■■□□□ 1.64
CLPTM1-201ENST00000337392 GAP43P17677 238 aa25.3■■□□□ 1.64
CLPTM1-201ENST00000337392 GYS2P54840 703 aa25.3■■□□□ 1.64
CLPTM1-201ENST00000337392 CBWD1Q9BRT8 395 aa25.3■■□□□ 1.64
CLPTM1-201ENST00000337392 FUT8Q9BYC5 575 aa25.3■■□□□ 1.64
CLPTM1-201ENST00000337392 USP20Q9Y2K6 914 aa25.3■■□□□ 1.64
CLPTM1-201ENST00000337392 CEP350Q5VT06 3117 aa25.29■■□□□ 1.64
CLPTM1-201ENST00000337392 ZNF131P52739 623 aa25.29■■□□□ 1.64
CLPTM1-201ENST00000337392 FSTL1Q12841 308 aa25.29■■□□□ 1.64
CLPTM1-201ENST00000337392 KIAA0753Q2KHM9 967 aa25.29■■□□□ 1.64
CLPTM1-201ENST00000337392 COL11A1P12107 1806 aaPredicted RBP25.29■■□□□ 1.64
CLPTM1-201ENST00000337392 YWHABP31946 246 aaKnown RBP25.29■■□□□ 1.64
CLPTM1-201ENST00000337392 IQCEQ6IPM2 695 aa25.29■■□□□ 1.64
CLPTM1-201ENST00000337392 SCYL3Q8IZE3 742 aa25.29■■□□□ 1.64
CLPTM1-201ENST00000337392 ZNF280CQ8ND82 737 aa25.29■■□□□ 1.64
CLPTM1-201ENST00000337392 HDAC7Q8WUI4 952 aa25.29■■□□□ 1.64
CLPTM1-201ENST00000337392 GOLGA8IPA6NC78 632 aa25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 GOLGA8JA6NMD2 632 aa25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 TACC1O75410 805 aa25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 GFPT2O94808 682 aa25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 P4HBP07237 508 aaKnown RBP25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 RPL13P26373 211 aaKnown RBP25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 MAPK8IP2Q13387 824 aaPredicted RBP25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 TMEM132BQ14DG7 1078 aa25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 CREG2Q8IUH2 290 aa25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 GBP3Q9H0R5 595 aa25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 BRCA2P51587 3418 aa25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 SLC16A4O15374 487 aa25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 ZBED4O75132 1171 aa25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 ZNF662Q6ZS27 426 aa25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 MCF2L2Q86YR7 1114 aa25.28■■□□□ 1.64
CLPTM1-201ENST00000337392 TMCO5BA8MYB1 307 aa25.27■■□□□ 1.64
CLPTM1-201ENST00000337392 PALMO75781 387 aa25.27■■□□□ 1.64
CLPTM1-201ENST00000337392 RPS12P25398 132 aaKnown RBP25.27■■□□□ 1.64
CLPTM1-201ENST00000337392 EHBP1Q8NDI1 1231 aa25.27■■□□□ 1.64
CLPTM1-201ENST00000337392 TRIM58Q8NG06 486 aa25.27■■□□□ 1.64
CLPTM1-201ENST00000337392 PICK1Q9NRD5 415 aa25.27■■□□□ 1.64
CLPTM1-201ENST00000337392 SNX12Q9UMY4 172 aa25.27■■□□□ 1.64
CLPTM1-201ENST00000337392 STK24Q9Y6E0 443 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms