RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 EIF3BP55884 814 aaKnown RBP25.65■■□□□ 1.7
TSKU-201ENST00000333090 PSMC6P62333 389 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 ZNF543Q08ER8 600 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 ERMARDQ5T6L9 678 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 RAB17Q9H0T7 212 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.65■■□□□ 1.7
TSKU-201ENST00000333090 ABCB4P21439 1286 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 JAM2P57087 298 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 PICALMQ13492 652 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 GIT2Q14161 759 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 E2F5Q15329 346 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 WLSQ5T9L3 541 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 SELENOSQ9BQE4 189 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 TACO1Q9BSH4 297 aaKnown RBP25.65■■□□□ 1.7
TSKU-201ENST00000333090 PPP1R9AQ9ULJ8 1098 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 TLDC2A0PJX2 215 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 SPDYE3A6NKU9 549 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 USP17L10C9JJH3 530 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 HOOK3Q86VS8 718 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 CCDC50Q8IVM0 306 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 GLYCTKQ8IVS8 523 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 REEP2Q9BRK0 252 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 PCDHB13Q9Y5F0 798 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 SMIM23A6NLE4 172 aa25.64■■□□□ 1.7
TSKU-201ENST00000333090 CLIC2O15247 247 aa25.64■■□□□ 1.7
TSKU-201ENST00000333090 CALUO43852 315 aaPredicted RBP25.64■■□□□ 1.7
TSKU-201ENST00000333090 ANXA13P27216 316 aa25.64■■□□□ 1.7
TSKU-201ENST00000333090 DR1Q01658 176 aa25.64■■□□□ 1.7
TSKU-201ENST00000333090 FAM196AQ6ZSG2 479 aa25.64■■□□□ 1.7
TSKU-201ENST00000333090 SLC35G2Q8TBE7 412 aa25.64■■□□□ 1.7
TSKU-201ENST00000333090 N4BP2L2Q92802 583 aaPredicted RBP25.64■■□□□ 1.7
TSKU-201ENST00000333090 GLG1Q92896 1179 aa25.64■■□□□ 1.7
TSKU-201ENST00000333090 SLC35C1Q96A29 364 aa25.64■■□□□ 1.7
TSKU-201ENST00000333090 FAM129AQ9BZQ8 928 aa25.64■■□□□ 1.7
TSKU-201ENST00000333090 NR3C1P04150 777 aa25.64■■□□□ 1.69
TSKU-201ENST00000333090 CHN1P15882 459 aa25.64■■□□□ 1.69
TSKU-201ENST00000333090 ELF1P32519 619 aa25.64■■□□□ 1.69
TSKU-201ENST00000333090 XRCC4Q13426 336 aa25.64■■□□□ 1.69
TSKU-201ENST00000333090 DCAF12L1Q5VU92 463 aa25.64■■□□□ 1.69
TSKU-201ENST00000333090 CATSPER3Q86XQ3 398 aa25.64■■□□□ 1.69
TSKU-201ENST00000333090 LNX1Q8TBB1 728 aaPredicted RBP25.64■■□□□ 1.69
TSKU-201ENST00000333090 INTUQ9ULD6 942 aa25.64■■□□□ 1.69
TSKU-201ENST00000333090 EVI5O60447 810 aa25.63■■□□□ 1.69
TSKU-201ENST00000333090 MMEP08473 750 aa25.63■■□□□ 1.69
TSKU-201ENST00000333090 NPEPPSP55786 919 aa25.63■■□□□ 1.69
TSKU-201ENST00000333090 KCTD1Q719H9 257 aa25.63■■□□□ 1.69
TSKU-201ENST00000333090 CCDC197Q8NCU1 140 aa25.63■■□□□ 1.69
TSKU-201ENST00000333090 P3H4Q92791 437 aa25.63■■□□□ 1.69
TSKU-201ENST00000333090 KDM4CQ9H3R0 1056 aa25.63■■□□□ 1.69
TSKU-201ENST00000333090 PDXKO00764 312 aa25.63■■□□□ 1.69
TSKU-201ENST00000333090 TRIM37O94972 964 aa25.63■■□□□ 1.69
TSKU-201ENST00000333090 PTENP60484 403 aa25.63■■□□□ 1.69
TSKU-201ENST00000333090 TXLNGYQ9BZA5 131 aa25.63■■□□□ 1.69
TSKU-201ENST00000333090 KCNMB3Q9NPA1 279 aa25.63■■□□□ 1.69
TSKU-201ENST00000333090 DAAM1Q9Y4D1 1078 aa25.63■■□□□ 1.69
TSKU-201ENST00000333090 ZBTB5O15062 677 aa25.62■■□□□ 1.69
TSKU-201ENST00000333090 FERP16591 822 aa25.62■■□□□ 1.69
TSKU-201ENST00000333090 STAT1P42224 750 aa25.62■■□□□ 1.69
TSKU-201ENST00000333090 PLTPP55058 493 aa25.62■■□□□ 1.69
TSKU-201ENST00000333090 ZNF211Q13398 564 aaPredicted RBP25.62■■□□□ 1.69
TSKU-201ENST00000333090 MSL1Q68DK7 614 aa25.62■■□□□ 1.69
TSKU-201ENST00000333090 CD209Q9NNX6 404 aa25.62■■□□□ 1.69
TSKU-201ENST00000333090 CDK5RAP2Q96SN8 1893 aa25.62■■□□□ 1.69
TSKU-201ENST00000333090 MFSD14BQ5SR56 506 aa25.62■■□□□ 1.69
TSKU-201ENST00000333090 ERP44Q9BS26 406 aa25.62■■□□□ 1.69
TSKU-201ENST00000333090 BCAS3Q9H6U6 928 aa25.62■■□□□ 1.69
TSKU-201ENST00000333090 ERVK-5Q9HDB9 667 aa25.62■■□□□ 1.69
TSKU-201ENST00000333090 IGSF9BQ9UPX0 1349 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 RSPH10B2B2RC85 870 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 C21orf2O43822 256 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 TTLL1O95922 423 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 RSPH10BP0C881 870 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 KCNA1Q09470 495 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 NEK9Q8TD19 979 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 EPB41L4BQ9H329 900 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 METTL14Q9HCE5 456 aaKnown RBP25.61■■□□□ 1.69
TSKU-201ENST00000333090 DNM3Q9UQ16 869 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 GOLGA6L10A0A0M3HER8 536 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 EZRP15311 586 aaKnown RBP25.61■■□□□ 1.69
TSKU-201ENST00000333090 PMS2P54278 862 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 DUPD1Q68J44 220 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 EPM2AIP1Q7L775 607 aaPredicted RBP25.61■■□□□ 1.69
TSKU-201ENST00000333090 ANKS4BQ8N8V4 417 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 RFFLQ8WZ73 363 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 ZDHHC18Q9NUE0 388 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 TTC7AQ9ULT0 858 aaPredicted RBP25.61■■□□□ 1.69
TSKU-201ENST00000333090 ATF5Q9Y2D1 282 aaPredicted RBP25.61■■□□□ 1.69
TSKU-201ENST00000333090 SNX24Q9Y343 169 aa25.61■■□□□ 1.69
TSKU-201ENST00000333090 ASTN1O14525 1302 aa25.6■■□□□ 1.69
TSKU-201ENST00000333090 CCT8L1PA6NM43 557 aa25.6■■□□□ 1.69
TSKU-201ENST00000333090 DDX3YO15523 660 aaKnown RBP25.6■■□□□ 1.69
TSKU-201ENST00000333090 GCNT3O95395 438 aa25.6■■□□□ 1.69
TSKU-201ENST00000333090 RPL13P26373 211 aaKnown RBP25.6■■□□□ 1.69
TSKU-201ENST00000333090 GPSM2P81274 684 aa25.6■■□□□ 1.69
TSKU-201ENST00000333090 GRAPQ13588 217 aa25.6■■□□□ 1.69
TSKU-201ENST00000333090 DENND2CQ68D51 928 aa25.6■■□□□ 1.69
TSKU-201ENST00000333090 GRAPLQ8TC17 118 aaPredicted RBP25.6■■□□□ 1.69
TSKU-201ENST00000333090 CTNNBL1Q8WYA6 563 aaPredicted RBP25.6■■□□□ 1.69
TSKU-201ENST00000333090 CENPTQ96BT3 561 aa25.6■■□□□ 1.69
TSKU-201ENST00000333090 ZNF317Q96PQ6 595 aaPredicted RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms