RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 CSRNP1Q96S65 589 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 NT5C3AQ9H0P0 336 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 GOLPH3Q9H4A6 298 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 ZHX3Q9H4I2 956 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 KCNMB3Q9NPA1 279 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 PI4KBQ9UBF8 816 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 ADAMTS1Q9UHI8 967 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 NFU1Q9UMS0 254 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 PCDHGC5Q9Y5F6 944 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 GCFC2P16383 781 aaKnown RBP11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 TAL1P17542 331 aaPredicted RBP11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 IRAK1P51617 712 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 MRPL12P52815 198 aaKnown RBP11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 SLC12A3P55017 1021 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 ADAM9Q13443 819 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 TRADDQ15628 312 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 QRICH1Q2TAL8 776 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 CFAP221Q4G0U5 840 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 MEI1Q5TIA1 1274 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 ANGEL2Q5VTE6 544 aaKnown RBP11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 FKBP1CQ5VVH2 108 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 CHADLQ6NUI6 762 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 DPY19L2P1Q6NXN4 242 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 CDAN1Q8IWY9 1227 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 SH2D3CQ8N5H7 860 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 ANO3Q9BYT9 981 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 BCAS3Q9H6U6 928 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 DNAJC18Q9H819 358 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 POLD4Q9HCU8 107 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 GDF3Q9NR23 364 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 ADARB2Q9NS39 739 aaKnown RBP11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 FRMD3A2A2Y4 597 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 GOLGA8KD6RF30 607 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 HOXA7P31268 230 aaPredicted RBP11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 PSMC6P62333 389 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 GUCY2DQ02846 1103 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 KLHL30Q0D2K2 578 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 KCNH2Q12809 1159 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 PPFIA1Q13136 1202 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 RASA3Q14644 834 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 ASIC2Q16515 512 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 PTPROQ16827 1216 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 KCTD19Q17RG1 926 aaPredicted RBP11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 KIAA0753Q2KHM9 967 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 GPATCH4Q5T3I0 446 aaKnown RBP11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 FAM83AQ86UY5 434 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 L3MBTL3Q96JM7 780 aaPredicted RBP11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 KRT12Q99456 494 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 NUCKS1Q9H1E3 243 aaKnown RBP11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 EPB41L5Q9HCM4 733 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 AJAP1Q9UKB5 411 aaPredicted RBP11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 ATRNL1Q5VV63 1379 aa11.01□□□□□ -0.65
PRAMEF1-201ENST00000332296 SCN4AP35499 1836 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 MEIS1O00470 390 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 KRT14P02533 472 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 SLC9A1P19634 815 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 NR2F2P24468 414 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 HOXD13P35453 343 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 CCT5P48643 541 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 CORO7P57737 925 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 SNAP25P60880 206 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 GNGT1P63211 74 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 SPIRE1Q08AE8 756 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 TNFAIP1Q13829 316 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 SREK1Q8WXA9 508 aaKnown RBP11□□□□□ -0.65
PRAMEF1-201ENST00000332296 CASKIN2Q8WXE0 1202 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 CCDC43Q96MW1 224 aaKnown RBP11□□□□□ -0.65
PRAMEF1-201ENST00000332296 CAPS2Q9BXY5 557 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 BMP2KQ9NSY1 1161 aaPredicted RBP11□□□□□ -0.65
PRAMEF1-201ENST00000332296 GGA3Q9NZ52 723 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 AIPL1Q9NZN9 384 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 FARP1Q9Y4F1 1045 aaPredicted RBP11□□□□□ -0.65
PRAMEF1-201ENST00000332296 HSF2BPO75031 334 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 GNA14O95837 355 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 KRT18P05783 430 aaKnown RBP11□□□□□ -0.65
PRAMEF1-201ENST00000332296 MYBP10242 640 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 EPB41P11171 864 aaKnown RBP11□□□□□ -0.65
PRAMEF1-201ENST00000332296 GUCY2FP51841 1108 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 PTK2Q05397 1052 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 CDC37Q16543 378 aaPredicted RBP11□□□□□ -0.65
PRAMEF1-201ENST00000332296 GLE1Q53GS7 698 aaKnown RBP11□□□□□ -0.65
PRAMEF1-201ENST00000332296 KCTD16Q68DU8 428 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 ZNF571Q7Z3V5 609 aaPredicted RBP11□□□□□ -0.65
PRAMEF1-201ENST00000332296 SFR1Q86XK3 245 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 IFT81Q8WYA0 676 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 PIK3R5Q8WYR1 880 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 DEFB129Q9H1M3 183 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 SWAP70Q9UH65 585 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 SMCHD1A6NHR9 2005 aa11□□□□□ -0.65
PRAMEF1-201ENST00000332296 RSPH10B2B2RC85 870 aa10.99□□□□□ -0.65
PRAMEF1-201ENST00000332296 MEIS2O14770 477 aa10.99□□□□□ -0.65
PRAMEF1-201ENST00000332296 EIF3HO15372 352 aaKnown RBP eCLIP10.99□□□□□ -0.65
PRAMEF1-201ENST00000332296 RAD51CO43502 376 aa10.99□□□□□ -0.65
PRAMEF1-201ENST00000332296 OPA1O60313 960 aa10.99□□□□□ -0.65
PRAMEF1-201ENST00000332296 RSPH10BP0C881 870 aa10.99□□□□□ -0.65
PRAMEF1-201ENST00000332296 EPHX2P34913 555 aa10.99□□□□□ -0.65
PRAMEF1-201ENST00000332296 PABPC4Q13310 644 aaKnown RBP eCLIP10.99□□□□□ -0.65
PRAMEF1-201ENST00000332296 PDCLQ13371 301 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms