RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 ALDH2P05091 517 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 ATXN8OSP0DMR3 200 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 KCNA2P16389 499 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 CALML3P27482 149 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 TMOD1P28289 359 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 KRT2P35908 639 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 CCT6AP40227 531 aaKnown RBP7.19□□□□□ -1.26
ZNF540-201ENST00000316433 ZAP70P43403 619 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 CCT8P50990 548 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 KRT83P78385 493 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 PNOCQ13519 176 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 EZH2Q15910 746 aaKnown RBP7.19□□□□□ -1.26
ZNF540-201ENST00000316433 BCL2A1Q16548 175 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 KLC3Q6P597 504 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 KIF6Q6ZMV9 814 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 TRPM8Q7Z2W7 1104 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 CCNJLQ8IV13 435 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 HAUS1Q96CS2 278 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 AGBL1Q96MI9 1066 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 TCEANC2Q96MN5 208 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 ORAI2Q96SN7 254 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 LRRC1Q9BTT6 524 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 SYNCQ9H7C4 482 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 TMBIM4Q9HC24 238 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 STK38LQ9Y2H1 464 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 USH1CQ9Y6N9 552 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 MYO3BQ8WXR4 1341 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 RARAP10276 462 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 PYGMP11217 842 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 PORP16435 677 aaPredicted RBP7.19□□□□□ -1.26
ZNF540-201ENST00000316433 KCNA3P22001 575 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 CALB2P22676 271 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 CEBPAP49715 358 aaPredicted RBP7.19□□□□□ -1.26
ZNF540-201ENST00000316433 ZNF131P52739 623 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 PDE1BQ01064 536 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 RBL2Q08999 1139 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 HSP90AA4PQ58FG1 418 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 SYDE2Q5VT97 1194 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 OLFML2BQ68BL8 750 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 TMTC3Q6ZXV5 915 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 MAP7D3Q8IWC1 876 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 DIS3L2Q8IYB7 885 aaKnown RBP7.19□□□□□ -1.26
ZNF540-201ENST00000316433 ADSSL1Q8N142 457 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 RNF10Q8N5U6 811 aaKnown RBP7.19□□□□□ -1.26
ZNF540-201ENST00000316433 DQX1Q8TE96 717 aaKnown RBP7.19□□□□□ -1.26
ZNF540-201ENST00000316433 KLHL29Q96CT2 875 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 CHMP6Q96FZ7 201 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 SLC7A5P2Q9GIP4 190 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 ECT2Q9H8V3 914 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 RNPEPL1Q9HAU8 725 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 PIH1D3Q9NQM4 214 aaKnown RBP7.19□□□□□ -1.26
ZNF540-201ENST00000316433 KBTBD4Q9NVX7 518 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 MKS1Q9NXB0 559 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 KIAA1522Q9P206 1035 aaPredicted RBP7.19□□□□□ -1.26
ZNF540-201ENST00000316433 GUCA1BQ9UMX6 200 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 HEY1Q9Y5J3 304 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 SLC12A7Q9Y666 1083 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 SART1O43290 800 aaKnown RBP7.19□□□□□ -1.26
ZNF540-201ENST00000316433 KDM1AO60341 852 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 MYBP10242 640 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 VAV2P52735 878 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 CTDSPL2Q05D32 466 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 TCEAL1Q15170 157 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 TCP11X2Q5H9J9 407 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 SLC10A5Q5PT55 438 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 RSPH3Q86UC2 560 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 FANCBQ8NB91 859 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 GIMAP8Q8ND71 665 aaPredicted RBP7.19□□□□□ -1.26
ZNF540-201ENST00000316433 SLC39A3Q9BRY0 314 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 STIM2Q9P246 746 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 NKX1-2Q9UD57 310 aaPredicted RBP7.19□□□□□ -1.26
ZNF540-201ENST00000316433 LRCH1Q9Y2L9 728 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 TTLL3Q9Y4R7 772 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 XDHP47989 1333 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 ZNF532Q9HCE3 1301 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 MAGEA13PA6NCF6 341 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 BOLA2-SMG1P6H3BVE0 249 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 TBC1D12O60347 775 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 STARD3NLO95772 234 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 GSTT2P0CG29 244 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 GSTT2BP0CG30 244 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 ENDOUP21128 410 aaKnown RBP7.18□□□□□ -1.26
ZNF540-201ENST00000316433 HALP42357 657 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 DNM2P50570 870 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.18□□□□□ -1.26
ZNF540-201ENST00000316433 TMCO5AQ8N6Q1 288 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 SYT2Q8N9I0 419 aaPredicted RBP7.18□□□□□ -1.26
ZNF540-201ENST00000316433 IRGQQ8WZA9 623 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 LTV1Q96GA3 475 aaPredicted RBP7.18□□□□□ -1.26
ZNF540-201ENST00000316433 IFT74Q96LB3 600 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 C7orf25Q9BPX7 421 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 RIOK1Q9BRS2 568 aaKnown RBP7.18□□□□□ -1.26
ZNF540-201ENST00000316433 ARHGEF3Q9NR81 526 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 DKK3Q9UBP4 350 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 CARD8Q9Y2G2 431 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 ZNF711Q9Y462 761 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 MYH14Q7Z406 1995 aaKnown RBP7.18□□□□□ -1.26
ZNF540-201ENST00000316433 SSU72P8A0A1W2PR75 194 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 CYP19A1P11511 503 aaPredicted RBP7.18□□□□□ -1.26
ZNF540-201ENST00000316433 HOXD10P28358 340 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms