RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 ACP6Q9NPH0 428 aa7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 PAXBP1Q9Y5B6 917 aa7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 WDR64B1ANS9 1081 aa7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 CHMP4BP1P59074 171 aa7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 PSMD2Q13200 908 aa7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 MAN2A1Q16706 1144 aa7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 LMBRD2Q68DH5 695 aaPredicted RBP7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 MS4A4AQ96JQ5 239 aa7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 PANX2Q96RD6 677 aa7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 ZIC5Q96T25 663 aa7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 TOPORSQ9NS56 1045 aaPredicted RBP7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 SLC9A2Q9UBY0 812 aa7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 AGTPBP1Q9UPW5 1226 aa7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 PCDHA10Q9Y5I2 948 aa7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 RANBP2P49792 3224 aaKnown RBP7.7□□□□□ -1.18
LYSMD3-201ENST00000315948 WNT7BP56706 349 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 GFPT1Q06210 699 aaPredicted RBP7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 TRAF1Q13077 416 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 MCTP2Q6DN12 878 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 CDR2LQ86X02 465 aaPredicted RBP7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 BAP1Q92560 729 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 TSG101Q99816 390 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 AGPAT3Q9NRZ7 376 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 HDAC6Q9UBN7 1215 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 CAPN11Q9UMQ6 739 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 GUCA1BQ9UMX6 200 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 SPATA31C2B4DYI2 1134 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 PDHXO00330 501 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 ATP2A1O14983 1001 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 ADSSP30520 456 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 NF2P35240 595 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 ARHGAP25P42331 645 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 ZNF131P52739 623 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 COBLL1Q53SF7 1204 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 LDLRAD1Q5T700 205 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 CNGA4Q8IV77 575 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 SLC35C1Q96A29 364 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 CCDC43Q96MW1 224 aaKnown RBP7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 DNAJC7Q99615 494 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 FHOD1Q9Y613 1164 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 ITIH6Q6UXX5 1313 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 HOXA7P31268 230 aaPredicted RBP7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 PSMC5P62195 406 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 ABHD15Q6UXT9 468 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 RIOX2Q8IUF8 465 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 SYCP3Q8IZU3 236 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 OR8K1Q8NGG5 319 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 HINFPQ9BQA5 517 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 NHEJ1Q9H9Q4 299 aaPredicted RBP7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 TBC1D22BQ9NU19 505 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 GINM1Q9NU53 330 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 SALL4Q9UJQ4 1053 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 KCNH4Q9UQ05 1017 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 SYNGAP1Q96PV0 1343 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 NDUFA10O95299 355 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 GGPS1O95749 300 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 NPTX2P47972 431 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 STXBP2Q15833 593 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 ZBTB41Q5SVQ8 909 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 DPY19L2P1Q6NXN4 242 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 CBWD2Q8IUF1 395 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 LRRC71Q8N4P6 559 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 FAM133AQ8N9E0 248 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 MYRIPQ8NFW9 859 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 DRC1Q96MC2 740 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 OLFML3Q9NRN5 406 aa7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.69□□□□□ -1.18
LYSMD3-201ENST00000315948 CCL15-CCL14A0A0B4J2E2 113 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 GSTTP1A0A1W2PQM5 241 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 MACROD2A1Z1Q3 448 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 CETN3O15182 167 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 URI1O94763 535 aaPredicted RBP7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 OAZ1P54368 228 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 ERVK-9P63128 1117 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 PPIL2Q13356 520 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 CCL15Q16663 113 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 PRAMEF19Q5SWL8 479 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 SLC39A4Q6P5W5 647 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 TAS1R3Q7RTX0 852 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 HAUS6Q7Z4H7 955 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 KAT5Q92993 513 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 CCDC127Q96BQ5 260 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 ZBTB45Q96K62 511 aaPredicted RBP7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 ERGIC2Q96RQ1 377 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 PSMB7Q99436 277 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 LRRC27Q9C0I9 530 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 GOLPH3Q9H4A6 298 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 ARMCX3Q9UH62 379 aaPredicted RBP7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 TRAF3IP3Q9Y228 551 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 ADCY6O43306 1168 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 SRGAP2O75044 1071 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 PPP1R37O75864 691 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 FARP2O94887 1054 aaPredicted RBP7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 EIF4A3P38919 411 aaKnown RBP7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 ETF1P62495 437 aaKnown RBP7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 FKBP15Q5T1M5 1219 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 CCDC112Q8NEF3 446 aa7.68□□□□□ -1.18
LYSMD3-201ENST00000315948 PACSIN1Q9BY11 444 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms