RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 GPC5P78333 572 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 MRPS9P82933 396 aaKnown RBP9.45□□□□□ -0.9
COL6A5-202ENST00000312481 AASDHQ4L235 1098 aaPredicted RBP9.45□□□□□ -0.9
COL6A5-202ENST00000312481 SCG3Q8WXD2 468 aaKnown RBP9.45□□□□□ -0.9
COL6A5-202ENST00000312481 SLC7A3Q8WY07 619 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 FBXO40Q9UH90 709 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 DAPK3O43293 454 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 SPAG7O75391 227 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 SERPINB9P50453 376 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 MXI1P50539 228 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 STAT2P52630 851 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 RASIP1Q5U651 963 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 BANK1Q8NDB2 785 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 GSDMBQ8TAX9 411 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 ANKRD36BP1Q96IX9 119 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 TEX12Q9BXU0 123 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 SUCLA2Q9P2R7 463 aaPredicted RBP9.45□□□□□ -0.9
COL6A5-202ENST00000312481 RHOBTB3O94955 611 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 LIG4P49917 911 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 ALKBH5Q6P6C2 394 aaKnown RBP9.45□□□□□ -0.9
COL6A5-202ENST00000312481 DHX40Q8IX18 779 aaKnown RBP9.45□□□□□ -0.9
COL6A5-202ENST00000312481 ENAHQ8N8S7 591 aaPredicted RBP9.45□□□□□ -0.9
COL6A5-202ENST00000312481 RIOK1Q9BRS2 568 aaKnown RBP9.45□□□□□ -0.9
COL6A5-202ENST00000312481 PCDHA1Q9Y5I3 950 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 MEGF6O75095 1541 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 M0QZ92 97 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 CREB3O43889 395 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 PPP1R37O75864 691 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 MAPK4P31152 587 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 EHHADHQ08426 723 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 HERC5Q9UII4 1024 aaKnown RBP9.44□□□□□ -0.9
COL6A5-202ENST00000312481 MMEP08473 750 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 TAC1P20366 129 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 GIPC2Q8TF65 315 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 U2AF1L4Q8WU68 220 aaKnown RBP9.44□□□□□ -0.9
COL6A5-202ENST00000312481 PI4KBQ9UBF8 816 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 SLX4Q8IY92 1834 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 ITIH2P19823 946 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 P3H1Q32P28 736 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 MFSD14BQ5SR56 506 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 CAVIN3Q969G5 261 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 SORCS3Q9UPU3 1222 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 UBR2Q8IWV8 1755 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 ZNF135P52742 658 aaPredicted RBP9.44□□□□□ -0.9
COL6A5-202ENST00000312481 STK33Q9BYT3 514 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 KANSL1LA0AUZ9 987 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 TYW5A2RUC4 315 aaKnown RBP9.44□□□□□ -0.9
COL6A5-202ENST00000312481 H2AFXP16104 143 aaPredicted RBP9.44□□□□□ -0.9
COL6A5-202ENST00000312481 CIITAP33076 1130 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 CORO7P57737 925 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 KRT76Q01546 638 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 LRMPQ12912 555 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 TMEM179Q6ZVK1 233 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 SIRT2Q8IXJ6 389 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 C2orf40Q9H1Z8 148 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 EPS8L2Q9H6S3 715 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 PYCARDQ9ULZ3 195 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 CARNS1A5YM72 827 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 ARMCX2Q7L311 632 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 WWP1Q9H0M0 922 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 FAM177BA6PVY3 158 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 HK2P52789 917 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 YARSP54577 528 aaKnown RBP9.44□□□□□ -0.9
COL6A5-202ENST00000312481 CENPCQ03188 943 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 FAM47CQ5HY64 1035 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 SERPINB12Q96P63 405 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 VPS9D1Q9Y2B5 631 aa9.44□□□□□ -0.9
COL6A5-202ENST00000312481 GRM4Q14833 912 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 FAR2Q96K12 515 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 STRNO43815 780 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 PRKAA2P54646 552 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 C11orf57Q6ZUT1 292 aaPredicted RBP9.43□□□□□ -0.9
COL6A5-202ENST00000312481 IGF2BP3O00425 579 aaKnown RBP eCLIP9.43□□□□□ -0.9
COL6A5-202ENST00000312481 CPP00450 1065 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 EIF2S1P05198 315 aaKnown RBP9.43□□□□□ -0.9
COL6A5-202ENST00000312481 KLC1Q07866 573 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 GEN1Q17RS7 908 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 SUGP1Q8IWZ8 645 aaKnown RBP9.43□□□□□ -0.9
COL6A5-202ENST00000312481 MB21D2Q8IYB1 491 aaPredicted RBP9.43□□□□□ -0.9
COL6A5-202ENST00000312481 RMDN2Q96LZ7 410 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 STRBPQ96SI9 672 aaKnown RBP9.43□□□□□ -0.9
COL6A5-202ENST00000312481 TNNI1P19237 187 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 TOB2Q14106 344 aaPredicted RBP9.43□□□□□ -0.9
COL6A5-202ENST00000312481 TAF1BQ53T94 588 aaPredicted RBP9.43□□□□□ -0.9
COL6A5-202ENST00000312481 EML4Q9HC35 981 aaKnown RBP9.43□□□□□ -0.9
COL6A5-202ENST00000312481 KLC4Q9NSK0 619 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 ARHGDIAP52565 204 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 CRELD2Q6UXH1 353 aaPredicted RBP9.43□□□□□ -0.9
COL6A5-202ENST00000312481 SPC25Q9HBM1 224 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 AIPL1Q9NZN9 384 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 SLC12A6Q9UHW9 1150 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 LAMB1P07942 1786 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 K7ENM7 598 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 OPHN1O60890 802 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 AGXT2Q9BYV1 514 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 PITPNM3Q9BZ71 974 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 IP6K2Q9UHH9 426 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 CLIC4Q9Y696 253 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 RAB15P59190 212 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 POLR2FP61218 127 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms