RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 NEK9Q8TD19 979 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 ARHGEF3Q9NR81 526 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 FGFR1OPO95684 399 aaKnown RBP19.56■□□□□ 0.72
SPSB4-201ENST00000310546 COPB2P35606 906 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 C7orf25Q9BPX7 421 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 NYXQ9GZU5 481 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 NKX1-2Q9UD57 310 aaPredicted RBP19.56■□□□□ 0.72
SPSB4-201ENST00000310546 TCP11X1B4DZS4 312 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 SUN1O94901 812 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 PYGLP06737 847 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 CALML3P27482 149 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 PMS2P54278 862 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 AMPD3Q01432 767 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 EVX2Q03828 476 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 PRPF4BQ13523 1007 aaKnown RBP19.55■□□□□ 0.72
SPSB4-201ENST00000310546 MLXIPLQ9NP71 852 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 CES2O00748 559 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 MKRN4PQ13434 485 aaPredicted RBP19.55■□□□□ 0.72
SPSB4-201ENST00000310546 GALNTL6Q49A17 601 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 NUGGCQ68CJ6 796 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 FITM2Q8N6M3 262 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 TEX9Q8N6V9 391 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 SLITRK6Q9H5Y7 841 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 NR2E1Q9Y466 385 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 CYP7A1P22680 504 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 DYNLL1P63167 89 aaKnown RBP19.55■□□□□ 0.72
SPSB4-201ENST00000310546 GBP7Q8N8V2 638 aaPredicted RBP19.55■□□□□ 0.72
SPSB4-201ENST00000310546 GLIS3Q8NEA6 775 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 PGM2Q96G03 612 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 EPB41L4BQ9H329 900 aa19.55■□□□□ 0.72
SPSB4-201ENST00000310546 PABPC3Q9H361 631 aaKnown RBP19.55■□□□□ 0.72
SPSB4-201ENST00000310546 FGGP02679 453 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 TBC1D25Q3MII6 688 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 ZC3H12AQ5D1E8 599 aaKnown RBP19.54■□□□□ 0.72
SPSB4-201ENST00000310546 UBAP2Q5T6F2 1119 aaKnown RBP19.54■□□□□ 0.72
SPSB4-201ENST00000310546 RPUSD2Q8IZ73 545 aaKnown RBP19.54■□□□□ 0.72
SPSB4-201ENST00000310546 EPS8L3Q8TE67 593 aaKnown RBP19.54■□□□□ 0.72
SPSB4-201ENST00000310546 RNF25Q96BH1 459 aaPredicted RBP19.54■□□□□ 0.72
SPSB4-201ENST00000310546 EDEM3Q9BZQ6 932 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 DBR1Q9UK59 544 aaKnown RBP19.54■□□□□ 0.72
SPSB4-201ENST00000310546 C2CD2Q9Y426 696 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 TAF1LQ8IZX4 1826 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 FLT1P17948 1338 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 FAM170AA1A519 330 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 BHMG1C9JSJ3 638 aaPredicted RBP19.54■□□□□ 0.72
SPSB4-201ENST00000310546 TECP42680 631 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 RNASELQ05823 741 aaKnown RBP19.54■□□□□ 0.72
SPSB4-201ENST00000310546 PPP1R15BQ5SWA1 713 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 SOGA3Q5TF21 947 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 LMNTD2Q8IXW0 634 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 BORCS6Q96GS4 357 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 SYT15Q9BQS2 421 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 CUEDC2Q9H467 287 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 DOCK2Q92608 1830 aa19.54■□□□□ 0.72
SPSB4-201ENST00000310546 A0A1B0GVG6 124 aa19.53■□□□□ 0.72
SPSB4-201ENST00000310546 PTK2Q05397 1052 aa19.53■□□□□ 0.72
SPSB4-201ENST00000310546 CAVIN4Q5BKX8 364 aa19.53■□□□□ 0.72
SPSB4-201ENST00000310546 OTUD6AQ7L8S5 288 aa19.53■□□□□ 0.72
SPSB4-201ENST00000310546 DRAXINQ8NBI3 349 aaPredicted RBP19.53■□□□□ 0.72
SPSB4-201ENST00000310546 FBF1Q8TES7 1133 aa19.53■□□□□ 0.72
SPSB4-201ENST00000310546 ATP8B4Q8TF62 1192 aa19.53■□□□□ 0.72
SPSB4-201ENST00000310546 GLG1Q92896 1179 aa19.53■□□□□ 0.72
SPSB4-201ENST00000310546 PDGFDQ9GZP0 370 aaPredicted RBP19.53■□□□□ 0.72
SPSB4-201ENST00000310546 ETNK1Q9HBU6 452 aa19.53■□□□□ 0.72
SPSB4-201ENST00000310546 PCDHA4Q9UN74 947 aa19.53■□□□□ 0.72
SPSB4-201ENST00000310546 PNPLA7Q6ZV29 1317 aa19.53■□□□□ 0.72
SPSB4-201ENST00000310546 RAD23BP54727 409 aa19.53■□□□□ 0.72
SPSB4-201ENST00000310546 ASIC2Q16515 512 aa19.53■□□□□ 0.72
SPSB4-201ENST00000310546 LRRC55Q6ZSA7 311 aa19.53■□□□□ 0.72
SPSB4-201ENST00000310546 LRRC57Q8N9N7 239 aa19.53■□□□□ 0.72
SPSB4-201ENST00000310546 DDAH1O94760 285 aa19.52■□□□□ 0.72
SPSB4-201ENST00000310546 PRDX5P30044 214 aa19.52■□□□□ 0.72
SPSB4-201ENST00000310546 CCNG1P51959 295 aa19.52■□□□□ 0.72
SPSB4-201ENST00000310546 FAM47AQ5JRC9 791 aa19.52■□□□□ 0.72
SPSB4-201ENST00000310546 COL23A1Q86Y22 540 aaPredicted RBP19.52■□□□□ 0.72
SPSB4-201ENST00000310546 GALNT15Q8N3T1 639 aa19.52■□□□□ 0.72
SPSB4-201ENST00000310546 SYN2Q92777 582 aaPredicted RBP19.52■□□□□ 0.72
SPSB4-201ENST00000310546 TRAF5O00463 557 aa19.52■□□□□ 0.72
SPSB4-201ENST00000310546 GBP1P32455 592 aa19.52■□□□□ 0.72
SPSB4-201ENST00000310546 CNGA2Q16280 664 aa19.52■□□□□ 0.72
SPSB4-201ENST00000310546 EZH1Q92800 747 aaPredicted RBP19.52■□□□□ 0.72
SPSB4-201ENST00000310546 RPGRQ92834 1020 aaKnown RBP19.52■□□□□ 0.72
SPSB4-201ENST00000310546 EPAS1Q99814 870 aa19.52■□□□□ 0.72
SPSB4-201ENST00000310546 SEMA4AQ9H3S1 761 aa19.52■□□□□ 0.72
SPSB4-201ENST00000310546 MAGEF1Q9HAY2 307 aa19.52■□□□□ 0.72
SPSB4-201ENST00000310546 MTMR7Q9Y216 660 aa19.52■□□□□ 0.72
SPSB4-201ENST00000310546 SNX24Q9Y343 169 aa19.52■□□□□ 0.72
SPSB4-201ENST00000310546 NUDT17P0C025 328 aa19.52■□□□□ 0.71
SPSB4-201ENST00000310546 POLE2P56282 527 aa19.52■□□□□ 0.71
SPSB4-201ENST00000310546 EN1Q05925 392 aaPredicted RBP19.52■□□□□ 0.71
SPSB4-201ENST00000310546 SLC10A5Q5PT55 438 aa19.52■□□□□ 0.71
SPSB4-201ENST00000310546 TMEM154Q6P9G4 183 aa19.52■□□□□ 0.71
SPSB4-201ENST00000310546 FBXO25Q8TCJ0 367 aa19.52■□□□□ 0.71
SPSB4-201ENST00000310546 SEC14L1Q92503 715 aa19.52■□□□□ 0.71
SPSB4-201ENST00000310546 RPS6KC1Q96S38 1066 aa19.52■□□□□ 0.71
SPSB4-201ENST00000310546 TXLNGYQ9BZA5 131 aa19.52■□□□□ 0.71
SPSB4-201ENST00000310546 A0A1B0GUL6 1792 aa19.51■□□□□ 0.71
SPSB4-201ENST00000310546 H0Y3Z8 333 aa19.51■□□□□ 0.71
SPSB4-201ENST00000310546 RIMBP2O15034 1052 aa19.51■□□□□ 0.71
SPSB4-201ENST00000310546 LETM2Q2VYF4 491 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms