RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 C16orf45Q96MC5 204 aaPredicted RBP13.1□□□□□ -0.31
TRIM40-205ENST00000307859 STRA6Q9BX79 667 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 ABHD10Q9NUJ1 306 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 SLC9A2Q9UBY0 812 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 CAPN11Q9UMQ6 739 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 TTC26A0AVF1 554 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 CETN3O15182 167 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 DKC1O60832 514 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRIM40-205ENST00000307859 STBD1O95210 358 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 NR2F2P24468 414 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 NMT1P30419 496 aaKnown RBP13.09□□□□□ -0.31
TRIM40-205ENST00000307859 TERF1P54274 439 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 SREBF2Q12772 1141 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 STXBP4Q6ZWJ1 553 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 ZNF720Q7Z2F6 126 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 FAM178BQ8IXR5 827 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 SHCBP1Q8NEM2 672 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 ATP6V0A1Q93050 837 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 ARMC5Q96C12 935 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 POLD4Q9HCU8 107 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 TRMT1Q9NXH9 659 aaKnown RBP13.09□□□□□ -0.31
TRIM40-205ENST00000307859 PNMA3Q9UL41 463 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 SIK3Q9Y2K2 1263 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 SLC45A1Q9Y2W3 748 aa13.09□□□□□ -0.31
TRIM40-205ENST00000307859 DNAJC25-GNG10A0A024R161 153 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 BACH1O14867 736 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 PSAPP07602 524 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 KRT9P35527 623 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 MNX1P50219 401 aaPredicted RBP13.08□□□□□ -0.32
TRIM40-205ENST00000307859 ACTR2P61160 394 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 ADAM9Q13443 819 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 ALCAMQ13740 583 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 Q3C1V9 767 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 CCDC40Q4G0X9 1142 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 ODR4Q5SWX8 454 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 ABHD15Q6UXT9 468 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 MS4A4AQ96JQ5 239 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 FGD4Q96M96 766 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 DNAJC7Q99615 494 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 R3HDMLQ9H3Y0 253 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 MROH8Q9H579 483 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 FAM184BQ9ULE4 1060 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 IGSF9BQ9UPX0 1349 aa13.08□□□□□ -0.32
TRIM40-205ENST00000307859 A0A1W2PQJ5 194 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 KIF2AO00139 706 aaPredicted RBP13.07□□□□□ -0.32
TRIM40-205ENST00000307859 SLC16A3O15427 465 aaKnown RBP13.07□□□□□ -0.32
TRIM40-205ENST00000307859 TGFB1I1O43294 461 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 ZNF862O60290 1169 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 USO1O60763 962 aaKnown RBP13.07□□□□□ -0.32
TRIM40-205ENST00000307859 ATG7O95352 703 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 ALDH1A1P00352 501 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 NR3C1P04150 777 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 TNNT1P13805 278 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 RPL13P26373 211 aaKnown RBP13.07□□□□□ -0.32
TRIM40-205ENST00000307859 ERVK-9P63128 1117 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 ERVK-24P63145 666 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 SP2Q02086 613 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 KCNA1Q09470 495 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 PTPN14Q15678 1187 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 ANO5Q75V66 913 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 FRMD5Q7Z6J6 570 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 CCDC43Q96MW1 224 aaKnown RBP13.07□□□□□ -0.32
TRIM40-205ENST00000307859 LARSQ9P2J5 1176 aaKnown RBP13.07□□□□□ -0.32
TRIM40-205ENST00000307859 GABBR1Q9UBS5 961 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 R3HCC1Q9Y3T6 440 aaKnown RBP13.07□□□□□ -0.32
TRIM40-205ENST00000307859 ZNF236Q9UL36 1845 aa13.07□□□□□ -0.32
TRIM40-205ENST00000307859 LOC102724159A0A0B4J2E5 919 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 TMEM150BA6NC51 233 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 SOWAHDA6NJG2 315 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 ZSCAN12O43309 604 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 SUPT20HL2P0C7V6 817 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 CETPP11597 493 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 PLS3P13797 630 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 KLK7P49862 253 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 GTF2A2P52657 109 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 PWP2Q15269 919 aaKnown RBP13.06□□□□□ -0.32
TRIM40-205ENST00000307859 ZC2HC1CQ53FD0 456 aaPredicted RBP13.06□□□□□ -0.32
TRIM40-205ENST00000307859 XKR9Q5GH70 373 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 UTP14CQ5TAP6 766 aaKnown RBP13.06□□□□□ -0.32
TRIM40-205ENST00000307859 PLA2G4FQ68DD2 849 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 MIS18BP1Q6P0N0 1132 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 RAD9BQ6WBX8 426 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 OTUD6AQ7L8S5 288 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 TMTC1Q8IUR5 882 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 CCDC60Q8IWA6 550 aaPredicted RBP13.06□□□□□ -0.32
TRIM40-205ENST00000307859 REXO1L1PQ8IX06 675 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 OR8K1Q8NGG5 319 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 PRIMPOLQ96LW4 560 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 DRC1Q96MC2 740 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 MMP19Q99542 508 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 ST6GALNAC4Q9H4F1 302 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 PPP2R2CQ9Y2T4 447 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 LUC7L2Q9Y383 392 aaKnown RBP13.06□□□□□ -0.32
TRIM40-205ENST00000307859 TELO2Q9Y4R8 837 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 TRIM17Q9Y577 477 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 PCDHB13Q9Y5F0 798 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 TRIOBPQ9H2D6 2365 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 SYNGAP1Q96PV0 1343 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 TRIM21P19474 475 aaKnown RBP13.06□□□□□ -0.32
TRIM40-205ENST00000307859 EN2P19622 333 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms