RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 GOLGA6L6A8MZA4 724 aa20.44■□□□□ 0.86
SEC61A2-201ENST00000298428 PRPF6O94906 941 aaKnown RBP20.44■□□□□ 0.86
SEC61A2-201ENST00000298428 PLS3P13797 630 aa20.44■□□□□ 0.86
SEC61A2-201ENST00000298428 APTXQ7Z2E3 356 aaKnown RBP20.44■□□□□ 0.86
SEC61A2-201ENST00000298428 IRF2BP1Q8IU81 584 aa20.44■□□□□ 0.86
SEC61A2-201ENST00000298428 CREBRFQ8IUR6 639 aa20.44■□□□□ 0.86
SEC61A2-201ENST00000298428 ZNF507Q8TCN5 953 aa20.44■□□□□ 0.86
SEC61A2-201ENST00000298428 EEF2KMTQ96G04 330 aa20.44■□□□□ 0.86
SEC61A2-201ENST00000298428 FAM167AQ96KS9 214 aa20.44■□□□□ 0.86
SEC61A2-201ENST00000298428 NIFKQ9BYG3 293 aaKnown RBP20.44■□□□□ 0.86
SEC61A2-201ENST00000298428 ATP6V0A4Q9HBG4 840 aa20.44■□□□□ 0.86
SEC61A2-201ENST00000298428 NRBP2Q9NSY0 501 aa20.44■□□□□ 0.86
SEC61A2-201ENST00000298428 MAGEC2Q9UBF1 373 aaPredicted RBP20.44■□□□□ 0.86
SEC61A2-201ENST00000298428 LIMA1Q9UHB6 759 aaKnown RBP20.44■□□□□ 0.86
SEC61A2-201ENST00000298428 EEF1GP26641 437 aaKnown RBP20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 FCGRTP55899 365 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 KRT31Q15323 416 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 CCL14Q16627 93 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 KNOP1Q1ED39 458 aaKnown RBP20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 DUSP28Q4G0W2 176 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 OLFML2BQ68BL8 750 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 STXBP4Q6ZWJ1 553 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 PLPPR4Q7Z2D5 763 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 ZNF720Q7Z2F6 126 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 TRIM50Q86XT4 487 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 FAM114A1Q8IWE2 563 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 MCPH1Q8NEM0 835 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 EMID1Q96A84 441 aaPredicted RBP20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 A0A1B0GTH6 734 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 FGFR1OPO95684 399 aaKnown RBP20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 SMPD1P17405 629 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 PSMC4P43686 418 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 LACTBP83111 547 aaPredicted RBP20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 CCDC144BQ3MJ40 725 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 IQSEC1Q6DN90 963 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 PPP4R3CPQ6ZMV5 832 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 PPTC7Q8NI37 304 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 PDLIM7Q9NR12 457 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 INTS13Q9NVM9 706 aa20.43■□□□□ 0.86
SEC61A2-201ENST00000298428 UBE4BO95155 1302 aa20.42■□□□□ 0.86
SEC61A2-201ENST00000298428 K7ENM7 598 aa20.42■□□□□ 0.86
SEC61A2-201ENST00000298428 NKRFO15226 690 aaKnown RBP eCLIP20.42■□□□□ 0.86
SEC61A2-201ENST00000298428 MAPTP10636 758 aaKnown RBP20.42■□□□□ 0.86
SEC61A2-201ENST00000298428 MARK3P27448 753 aa20.42■□□□□ 0.86
SEC61A2-201ENST00000298428 HOXD13P35453 343 aa20.42■□□□□ 0.86
SEC61A2-201ENST00000298428 POLGP54098 1239 aaPredicted RBP20.42■□□□□ 0.86
SEC61A2-201ENST00000298428 IRF5Q13568 498 aa20.42■□□□□ 0.86
SEC61A2-201ENST00000298428 ZC2HC1CQ53FD0 456 aaPredicted RBP20.42■□□□□ 0.86
SEC61A2-201ENST00000298428 KIFAP3Q92845 792 aa20.42■□□□□ 0.86
SEC61A2-201ENST00000298428 ARHGAP39Q9C0H5 1083 aa20.42■□□□□ 0.86
SEC61A2-201ENST00000298428 SMARCAD1Q9H4L7 1026 aa20.42■□□□□ 0.86
SEC61A2-201ENST00000298428 PCDHB13Q9Y5F0 798 aa20.42■□□□□ 0.86
SEC61A2-201ENST00000298428 MGAMO43451 1857 aa20.42■□□□□ 0.86
SEC61A2-201ENST00000298428 LRRC10BA6NIK2 292 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 SLC26A2P50443 739 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 FKBP3Q00688 224 aaKnown RBP20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 EMC2Q15006 297 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 FILIP1LQ4L180 1135 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 LRRC55Q6ZSA7 311 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 BBXQ8WY36 941 aaPredicted RBP20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 CNOT6LQ96LI5 555 aaKnown RBP20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 XPNPEP1Q9NQW7 623 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 TBC1D8O95759 1140 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 CYP2C19P33261 490 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 PEX3P56589 373 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 KCNA1Q09470 495 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 NR1I3Q14994 352 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 EDRF1Q3B7T1 1238 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 HS1BP3Q53T59 392 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 PRAMEF19Q5SWL8 479 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 ATP8B4Q8TF62 1192 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 AFG1LQ8WV93 481 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 TAB2Q9NYJ8 693 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 TRAF3IP3Q9Y228 551 aa20.41■□□□□ 0.86
SEC61A2-201ENST00000298428 PDXKO00764 312 aa20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 COPB1P53618 953 aaKnown RBP20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 SOX10P56693 466 aa20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 TNFAIP2Q03169 654 aa20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 DMP1Q13316 513 aaPredicted RBP20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 ALCAMQ13740 583 aa20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 TARBP2Q15633 366 aaKnown RBP20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 TMC6Q7Z403 805 aa20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 OR6J1Q8NGC5 347 aa20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 SLC7A3Q8WY07 619 aa20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 CEP89Q96ST8 783 aa20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 STRA6Q9BX79 667 aa20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 DHX33Q9H6R0 707 aaKnown RBP20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 C17orf75Q9HAS0 396 aa20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 TYW1Q9NV66 732 aaKnown RBP20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 NRBP1Q9UHY1 535 aa20.4■□□□□ 0.86
SEC61A2-201ENST00000298428 ADCY6O43306 1168 aa20.39■□□□□ 0.86
SEC61A2-201ENST00000298428 CALUO43852 315 aaPredicted RBP20.39■□□□□ 0.86
SEC61A2-201ENST00000298428 PPP1R37O75864 691 aa20.39■□□□□ 0.86
SEC61A2-201ENST00000298428 RFC5P40937 340 aa20.39■□□□□ 0.86
SEC61A2-201ENST00000298428 PLCB4Q15147 1175 aa20.39■□□□□ 0.86
SEC61A2-201ENST00000298428 SLC17A8Q8NDX2 589 aa20.39■□□□□ 0.86
SEC61A2-201ENST00000298428 VPS16Q9H269 839 aa20.39■□□□□ 0.86
SEC61A2-201ENST00000298428 PPME1Q9Y570 386 aa20.39■□□□□ 0.86
SEC61A2-201ENST00000298428 ZMYM2Q9UBW7 1377 aa20.39■□□□□ 0.85
SEC61A2-201ENST00000298428 ZSWIM8A7E2V4 1837 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms