RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 MAPTP10636 758 aaKnown RBP15.68■□□□□ 0.1
C9orf3-202ENST00000297979 CETPP11597 493 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 KCTD2Q14681 263 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 SWSAP1Q6NVH7 229 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 ABHD15Q6UXT9 468 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 ANO5Q75V66 913 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 OTUD6AQ7L8S5 288 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 MMP19Q99542 508 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 SH2D3AQ9BRG2 576 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 SIK3Q9Y2K2 1263 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 PPP2R2CQ9Y2T4 447 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.68■□□□□ 0.1
C9orf3-202ENST00000297979 RASSF10A6NK89 507 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 TGFB1I1O43294 461 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 GTF2A2P52657 109 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 ERVK-9P63128 1117 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 ERVK-24P63145 666 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 NFIL3Q16649 462 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 TOGARAM2Q6ZUX3 1019 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 TRMT1LQ7Z2T5 733 aaKnown RBP15.68■□□□□ 0.1
C9orf3-202ENST00000297979 TMTC1Q8IUR5 882 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 OR8K1Q8NGG5 319 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 DNAJC7Q99615 494 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 FAM184BQ9ULE4 1060 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 TELO2Q9Y4R8 837 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 ARID2Q68CP9 1835 aa15.68■□□□□ 0.1
C9orf3-202ENST00000297979 K7ENM7 598 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 KIF2AO00139 706 aaPredicted RBP15.67■□□□□ 0.1
C9orf3-202ENST00000297979 ZNF862O60290 1169 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 SORBS3O60504 671 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 PPP1R37O75864 691 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 SUPT20HL2P0C7V6 817 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 CYP2C8P10632 490 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 PLS3P13797 630 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 NPEPPSP55786 919 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 CYFIP1Q7L576 1253 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 FRMD5Q7Z6J6 570 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 CCDC60Q8IWA6 550 aaPredicted RBP15.67■□□□□ 0.1
C9orf3-202ENST00000297979 SHCBP1Q8NEM2 672 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 MS4A4AQ96JQ5 239 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 STRA6Q9BX79 667 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 SLC45A1Q9Y2W3 748 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 A0A1W2PQJ5 194 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 SLC16A3O15427 465 aaKnown RBP15.67■□□□□ 0.1
C9orf3-202ENST00000297979 PGK2P07205 417 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 ALCAMQ13740 583 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 MTF1Q14872 753 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 CYP26C1Q6V0L0 522 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 RAD9BQ6WBX8 426 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 PRIMPOLQ96LW4 560 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 IGSF9BQ9UPX0 1349 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 DNAJC25-GNG10A0A024R161 153 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 UBA1P22314 1058 aaKnown RBP15.67■□□□□ 0.1
C9orf3-202ENST00000297979 TERF1P54274 439 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 TSR1Q2NL82 804 aaKnown RBP15.67■□□□□ 0.1
C9orf3-202ENST00000297979 WDR78Q5VTH9 848 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 HS2ST1Q7LGA3 356 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 KSR1Q8IVT5 923 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 C2orf69Q8N8R5 385 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 SMCR8Q8TEV9 937 aaPredicted RBP15.67■□□□□ 0.1
C9orf3-202ENST00000297979 FGD4Q96M96 766 aa15.67■□□□□ 0.1
C9orf3-202ENST00000297979 ARMCX3Q9UH62 379 aaPredicted RBP15.67■□□□□ 0.1
C9orf3-202ENST00000297979 CCL15-CCL14A0A0B4J2E2 113 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 PDHXO00330 501 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 STBD1O95210 358 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 EPB41P11171 864 aaKnown RBP15.66■□□□□ 0.1
C9orf3-202ENST00000297979 ZBED6P86452 979 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 PRKCEQ02156 737 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 CCL15Q16663 113 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 REXO1L1PQ8IX06 675 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 CEP170P1Q96L14 293 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 GBP3Q9H0R5 595 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 AGPAT5Q9NUQ2 364 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 GOLGA6L9A6NEM1 432 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 CLIC2O15247 247 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 AKAP3O75969 853 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 CELF2O95319 508 aaKnown RBP15.66■□□□□ 0.1
C9orf3-202ENST00000297979 ATG7O95352 703 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 MKRN3Q13064 507 aaKnown RBP15.66■□□□□ 0.1
C9orf3-202ENST00000297979 ZNF397Q8NF99 534 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-202ENST00000297979 GOLGA5Q8TBA6 731 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 SGSM3Q96HU1 749 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 DESI2Q9BSY9 194 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 METTL14Q9HCE5 456 aaKnown RBP15.66■□□□□ 0.1
C9orf3-202ENST00000297979 SYNGAP1Q96PV0 1343 aa15.66■□□□□ 0.1
C9orf3-202ENST00000297979 BTBD19C9JJ37 291 aa15.65■□□□□ 0.1
C9orf3-202ENST00000297979 CCDC175P0C221 793 aa15.65■□□□□ 0.1
C9orf3-202ENST00000297979 TGFB3P10600 412 aa15.65■□□□□ 0.1
C9orf3-202ENST00000297979 PPP2R3AQ06190 1150 aa15.65■□□□□ 0.1
C9orf3-202ENST00000297979 NEDD9Q14511 834 aa15.65■□□□□ 0.1
C9orf3-202ENST00000297979 FAM102BQ5T8I3 360 aa15.65■□□□□ 0.1
C9orf3-202ENST00000297979 MMRN2Q9H8L6 949 aa15.65■□□□□ 0.1
C9orf3-202ENST00000297979 GPRC5CQ9NQ84 441 aa15.65■□□□□ 0.1
C9orf3-202ENST00000297979 FAM207AQ9NSI2 230 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-202ENST00000297979 SEPT9Q9UHD8 586 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-202ENST00000297979 SYCP3Q8IZU3 236 aa15.65■□□□□ 0.1
C9orf3-202ENST00000297979 SLC17A8Q8NDX2 589 aa15.65■□□□□ 0.1
C9orf3-202ENST00000297979 GPRC5AQ8NFJ5 357 aa15.65■□□□□ 0.1
C9orf3-202ENST00000297979 BRI3BPQ8WY22 251 aa15.65■□□□□ 0.1
C9orf3-202ENST00000297979 IKZF4Q9H2S9 585 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms