RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 SRRM1Q8IYB3 904 aaKnown RBP17.26■□□□□ 0.35
SSRP1-202ENST00000293880 NLRP4Q96MN2 994 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 ADAMTS1Q9UHI8 967 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 MOSPD1Q9UJG1 213 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 NOC2LQ9Y3T9 749 aaKnown RBP17.26■□□□□ 0.35
SSRP1-202ENST00000293880 MAGEA9P43362 315 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 BBS5Q8N3I7 341 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 PDCD6IPQ8WUM4 868 aaKnown RBP17.26■□□□□ 0.35
SSRP1-202ENST00000293880 DCPSQ96C86 337 aaKnown RBP17.26■□□□□ 0.35
SSRP1-202ENST00000293880 TUBB6Q9BUF5 446 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 MSTO1Q9BUK6 570 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 LRRC4Q9HBW1 653 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 FAM161BQ96MY7 647 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 SLC13A1Q9BZW2 595 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 MLH3Q9UHC1 1453 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 SYDE2Q5VT97 1194 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 RNF135Q8IUD6 432 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 ADA2Q9NZK5 511 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 TEKT2Q9UIF3 430 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 WDR64B1ANS9 1081 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 SLC7A3Q8WY07 619 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 ITM2BQ9Y287 266 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 DCTN3O75935 186 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 SNRNP27Q8WVK2 155 aaKnown RBP17.25■□□□□ 0.35
SSRP1-202ENST00000293880 TRIM55Q9BYV6 548 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 TMEM60Q9H2L4 133 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 SLC13A4Q9UKG4 626 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 ADD2P35612 726 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 DRP2Q13474 957 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 ASPRV1Q53RT3 343 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 TGS1Q96RS0 853 aaKnown RBP17.25■□□□□ 0.35
SSRP1-202ENST00000293880 UPF3AQ9H1J1 476 aaKnown RBP17.25■□□□□ 0.35
SSRP1-202ENST00000293880 NBNO60934 754 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 PMS2P54278 862 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 RWDD2BP57060 319 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 TADA2BQ86TJ2 420 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 CUEDC2Q9H467 287 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 ANAPC7Q9UJX3 599 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 MYOM2P54296 1465 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 LRRC53A6NM62 1247 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 DIAPH2O60879 1101 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 SOX11P35716 441 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 PEX3P56589 373 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 SPARCL1Q14515 664 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 RFWD2Q8NHY2 731 aa17.25■□□□□ 0.35
SSRP1-202ENST00000293880 NR1H4Q96RI1 486 aaPredicted RBP17.25■□□□□ 0.35
SSRP1-202ENST00000293880 AFF4Q9UHB7 1163 aaKnown RBP17.25■□□□□ 0.35
SSRP1-202ENST00000293880 PIK3R2O00459 728 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 STAT2P52630 851 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 DEUP1Q05D60 604 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 SLC27A3Q5K4L6 730 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 ZNF668Q96K58 619 aaPredicted RBP17.24■□□□□ 0.35
SSRP1-202ENST00000293880 ING2Q9H160 280 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 FGFR1OP2Q9NVK5 253 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 KIAA0232Q92628 1395 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 KCNA4P22459 653 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 ZBED6P86452 979 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 ERICH1Q86X53 443 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 GIPC2Q8TF65 315 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 TMEM206Q9H813 350 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 PARVGQ9HBI0 331 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 ZSWIM5Q9P217 1185 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 ATXN3P54252 364 aaPredicted RBP17.24■□□□□ 0.35
SSRP1-202ENST00000293880 OR6B3Q8NGW1 331 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 ZFYVE19Q96K21 471 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 SH3GL3Q99963 347 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 ABHD10Q9NUJ1 306 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 MXI1P50539 228 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 FBXW4P57775 412 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 CDC37Q16543 378 aaPredicted RBP17.24■□□□□ 0.35
SSRP1-202ENST00000293880 PARP9Q8IXQ6 854 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 GANCQ8TET4 914 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 OSBP2Q969R2 916 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 RNF26Q9BY78 433 aaPredicted RBP17.24■□□□□ 0.35
SSRP1-202ENST00000293880 SRPRBQ9Y5M8 271 aaKnown RBP17.24■□□□□ 0.35
SSRP1-202ENST00000293880 CHEK2O96017 543 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 MDM2Q00987 491 aaPredicted RBP17.24■□□□□ 0.35
SSRP1-202ENST00000293880 ATP6V0A1Q93050 837 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 PRMT1Q99873 361 aaKnown RBP17.24■□□□□ 0.35
SSRP1-202ENST00000293880 PRDM5Q9NQX1 630 aaPredicted RBP17.24■□□□□ 0.35
SSRP1-202ENST00000293880 RHBDL2Q9NX52 303 aa17.24■□□□□ 0.35
SSRP1-202ENST00000293880 APOBEC2Q9Y235 224 aaKnown RBP17.24■□□□□ 0.35
SSRP1-202ENST00000293880 SNX2O60749 519 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 ANXA13P27216 316 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 CUL1Q13616 776 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 TERF2Q15554 542 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 ARMC2Q8NEN0 867 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 AK8Q96MA6 479 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 TTC1Q99614 292 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 FAM8A1Q9UBU6 413 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 SLC12A6Q9UHW9 1150 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 DNAJC12Q9UKB3 198 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 CARSP49589 748 aaKnown RBP17.23■□□□□ 0.35
SSRP1-202ENST00000293880 POU5F1BQ06416 359 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 CCDC15Q0P6D6 951 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 KPNA2P52292 529 aaKnown RBP17.23■□□□□ 0.35
SSRP1-202ENST00000293880 CAPRIN2Q6IMN6 1127 aaKnown RBP17.23■□□□□ 0.35
SSRP1-202ENST00000293880 CCHCR1Q8TD31 782 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 NACC1Q96RE7 527 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 RPF1Q9H9Y2 349 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms