RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 DDX21Q9NR30 783 aaKnown RBP eCLIP5.4□□□□□ -1.54
CD44-202ENST00000278385 INTS7Q9NVH2 962 aaKnown RBP5.4□□□□□ -1.54
CD44-202ENST00000278385 IP6K2Q9UHH9 426 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 RNF114Q9Y508 228 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 MED1Q15648 1581 aaPredicted RBP5.4□□□□□ -1.55
CD44-202ENST00000278385 LTBP3Q9NS15 1303 aa5.4□□□□□ -1.55
CD44-202ENST00000278385 PIK3C2GO75747 1445 aa5.4□□□□□ -1.55
CD44-202ENST00000278385 C1orf167Q5SNV9 1468 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 NRXN3Q9Y4C0 1643 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 B2RBV5 119 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 BRINP1O60477 761 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 TBC1D8O95759 1140 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 GSTM1P09488 218 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 SETSIPP0DME0 302 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 ATICP31939 592 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 ARL4AP40617 200 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 ZBED6P86452 979 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 TEKQ02763 1124 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 GRM3Q14832 879 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 SLC9A5Q14940 896 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 RALGPS1Q5JS13 557 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 GPR158Q5T848 1215 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 SYDE2Q5VT97 1194 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 RSRC2Q7L4I2 434 aaKnown RBP5.39□□□□□ -1.55
CD44-202ENST00000278385 SPATS2Q86XZ4 545 aaKnown RBP5.39□□□□□ -1.55
CD44-202ENST00000278385 FAM178BQ8IXR5 827 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 OR8H2Q8N162 312 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 NKAIN3Q8N8D7 197 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 LEO1Q8WVC0 666 aaPredicted RBP5.39□□□□□ -1.55
CD44-202ENST00000278385 DDX1Q92499 740 aaKnown RBP5.39□□□□□ -1.55
CD44-202ENST00000278385 TNIP3Q96KP6 325 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 FGD4Q96M96 766 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 CLUHP3Q96NS8 147 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 MYCBPQ99417 103 aaPredicted RBP5.39□□□□□ -1.55
CD44-202ENST00000278385 SEZ6LQ9BYH1 1024 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 KMT5AQ9NQR1 393 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 MAN1C1Q9NR34 630 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 POGKQ9P215 609 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 TNFRSF10DQ9UBN6 386 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 RCAN3Q9UKA8 241 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 PNMA8BQ9ULN7 279 aaPredicted RBP5.39□□□□□ -1.55
CD44-202ENST00000278385 DMTF1Q9Y222 760 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 AKT3Q9Y243 479 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 FAM50BQ9Y247 325 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 ZNF451Q9Y4E5 1061 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 ROBO1Q9Y6N7 1651 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 NPHP3Q7Z494 1330 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 MYO5BQ9ULV0 1848 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 TECPR2O15040 1411 aa5.39□□□□□ -1.55
CD44-202ENST00000278385 YTHDC2Q9H6S0 1430 aaKnown RBP5.39□□□□□ -1.55
CD44-202ENST00000278385 FAM83GA6ND36 823 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 J3KRW8 73 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 PMM2O15305 246 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 FBXO21O94952 628 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 CD3EP07766 207 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 GLI1P08151 1106 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 NCAM1P13591 858 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 VAV1P15498 845 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 TSPAN7P41732 249 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 ECE1P42892 770 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 KIR2DL1P43626 348 aaPredicted RBP5.38□□□□□ -1.55
CD44-202ENST00000278385 KIR2DL2P43627 348 aaPredicted RBP5.38□□□□□ -1.55
CD44-202ENST00000278385 SEPHS1P49903 392 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 ZNF445P59923 1031 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 AMPD2Q01433 879 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 GALEQ14376 348 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 SNX17Q15036 470 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 DHCR24Q15392 516 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 SV2CQ496J9 727 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 HLA-DQA1Q5Y7H0 255 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 MRM1Q6IN84 353 aaKnown RBP5.38□□□□□ -1.55
CD44-202ENST00000278385 C6orf15Q6UXA7 325 aaPredicted RBP5.38□□□□□ -1.55
CD44-202ENST00000278385 C1orf122Q6ZSJ8 110 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 CEP128Q6ZU80 1094 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 PNMA8AQ86V59 439 aaPredicted RBP5.38□□□□□ -1.55
CD44-202ENST00000278385 PPFIBP1Q86W92 1011 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 SKAP1Q86WV1 359 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 WFDC3Q8IUB2 231 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 KSR1Q8IVT5 923 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 FAM186BQ8IYM0 893 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 PPM1KQ8N3J5 372 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 CNTD1Q8N815 330 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 GIMAP8Q8ND71 665 aaPredicted RBP5.38□□□□□ -1.55
CD44-202ENST00000278385 ADCY4Q8NFM4 1077 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 DDX17Q92841 729 aaKnown RBP5.38□□□□□ -1.55
CD44-202ENST00000278385 CDHR1Q96JP9 859 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 FCRL2Q96LA5 508 aaPredicted RBP5.38□□□□□ -1.55
CD44-202ENST00000278385 PRAM1Q96QH2 718 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 GPR160Q9UJ42 338 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 TAF6LQ9Y6J9 622 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 KIF1BO60333 1816 aa5.38□□□□□ -1.55
CD44-202ENST00000278385 XIRP1Q702N8 1843 aaKnown RBP5.38□□□□□ -1.55
CD44-202ENST00000278385 AHDC1Q5TGY3 1603 aaPredicted RBP5.37□□□□□ -1.55
CD44-202ENST00000278385 XRN1Q8IZH2 1706 aaKnown RBP5.37□□□□□ -1.55
CD44-202ENST00000278385 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.37□□□□□ -1.55
CD44-202ENST00000278385 WTIPA6NIX2 430 aaPredicted RBP5.37□□□□□ -1.55
CD44-202ENST00000278385 F5H423 210 aaPredicted RBP5.37□□□□□ -1.55
CD44-202ENST00000278385 K7ENM7 598 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 ERC2O15083 957 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 ZNF205O95201 554 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms