RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 CLRN3Q8NCR9 226 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 CLIP3Q96DZ5 547 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 PASKQ96RG2 1323 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 MAP7D2Q96T17 732 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 PDCD2LQ9BRP1 358 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 NACAP1Q9BZK3 213 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 KLHL25Q9H0H3 589 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 SEMA6BQ9H3T3 888 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 SH2B1Q9NRF2 756 aaPredicted RBP3.27□□□□□ -1.89
HERC4-201ENST00000277817 ANKEF1Q9NU02 776 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 GGA3Q9NZ52 723 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 ABCF2Q9UG63 623 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 STAP2Q9UGK3 403 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 IP6K2Q9UHH9 426 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 DACH1Q9UI36 760 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 SYNRGQ9UMZ2 1314 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 DMTF1Q9Y222 760 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 EMC9Q9Y3B6 208 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 GOLIM4O00461 696 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 EFCAB14O75071 495 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 PF4V1P10720 104 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 ACPPP15309 386 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 VCAM1P19320 739 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 IL11P20809 199 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 PTGIRP43119 386 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 TDO2P48775 406 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 NR5A1Q13285 461 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 IMMTQ16891 758 aaKnown RBP3.27□□□□□ -1.89
HERC4-201ENST00000277817 ABCB5Q2M3G0 1257 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 LINC01559Q495D7 138 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 DENND5AQ6IQ26 1287 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 NBPF10Q6P3W6 841 aaKnown RBP3.27□□□□□ -1.89
HERC4-201ENST00000277817 KRT28Q7Z3Y7 464 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 NBPF11Q86T75 865 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 CCDC112Q8NEF3 446 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 SNX21Q969T3 373 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 CRB3Q9BUF7 120 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 SCAND2PQ9GZW5 306 aaPredicted RBP3.27□□□□□ -1.89
HERC4-201ENST00000277817 LMAN2LQ9H0V9 348 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 IL21Q9HBE4 155 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 EMC7Q9NPA0 242 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 SH3GLB2Q9NR46 395 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 LRP2BPQ9P2M1 347 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 B4GALT6Q9UBX8 382 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 PA2G4Q9UQ80 394 aaKnown RBP3.27□□□□□ -1.89
HERC4-201ENST00000277817 MTNR1BP49286 362 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 BPIFB3P59826 476 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 GABREP78334 506 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 WWC2Q6AWC2 1192 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 TANGO2Q6ICL3 276 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ZSCAN25Q6NSZ9 544 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ZCCHC8Q6NZY4 707 aaKnown RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 VHLLQ6RSH7 139 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 TPTE2Q6XPS3 522 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 COPS6Q7L5N1 327 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 KCNK18Q7Z418 384 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 MTERF4Q7Z6M4 381 aaKnown RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 ZNF227Q86WZ6 799 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 KREMEN2Q8NCW0 462 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 AIDAQ96BJ3 306 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 MTMR8Q96EF0 704 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ZNF830Q96NB3 372 aaPredicted RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 TTC1Q99614 292 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 USP26Q9BXU7 913 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 LRRC2Q9BYS8 371 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 CDIP1Q9H305 208 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ARGLU1Q9NWB6 273 aaPredicted RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 RAI14Q9P0K7 980 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ADAM30Q9UKF2 790 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 POLHQ9Y253 713 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 DTNBO60941 627 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 TMCC2O75069 709 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ADCY5O95622 1261 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 STARD3NLO95772 234 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 CYP11A1P05108 521 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ZNF865P0CJ78 1059 aaPredicted RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 CPEP16870 476 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 GPTP24298 496 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 HAND2P61296 217 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 STRN3Q13033 797 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 FASTKD5Q7L8L6 764 aaKnown RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 VN1R5Q7Z5H4 357 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 RAB11FIP4Q86YS3 637 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 TMEM192Q8IY95 271 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 CEP57L1Q8IYX8 460 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 SLC16A10Q8TF71 515 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 SLC7A3Q8WY07 619 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ZBTB10Q96DT7 871 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 CDHR1Q96JP9 859 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 WASH6PQ9NQA3 447 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 RXFP3Q9NSD7 469 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 CNPY2Q9Y2B0 182 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 ATP6V0A2Q9Y487 856 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 MGAMO43451 1857 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 POU2F2P09086 479 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 NTF4P34130 210 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 IL13P35225 146 aa3.26□□□□□ -1.89
HERC4-201ENST00000277817 IFIT5Q13325 482 aaKnown RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 ZNF362Q5T0B9 420 aaPredicted RBP3.26□□□□□ -1.89
HERC4-201ENST00000277817 TEX35Q5T0J7 233 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms