RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 ARMCX3Q9UH62 379 aaPredicted RBP16.81■□□□□ 0.28
UBR3-201ENST00000272793 KRT1P04264 644 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 PPP3CCP48454 512 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 BCAP31P51572 246 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 CAPRIN2Q6IMN6 1127 aaKnown RBP16.81■□□□□ 0.28
UBR3-201ENST00000272793 SLC35F6Q8N357 371 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 DCTN4Q9UJW0 460 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 PIPSLA2A3N6 862 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 MYOCDQ8IZQ8 938 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 RAB42Q8N4Z0 105 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 GINM1Q9NU53 330 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 PRPSAP2O60256 369 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 FAM227BQ96M60 508 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 PCDHA12Q9UN75 941 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 M0R3G1 203 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 GYS1P13807 737 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 CCDC81Q6ZN84 652 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 KRT78Q8N1N4 520 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 PRPF18Q99633 342 aaKnown RBP16.8■□□□□ 0.28
UBR3-201ENST00000272793 ZMYND12Q9H0C1 365 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 NT5C3AQ9H0P0 336 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 HDHD2Q9H0R4 259 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 LMBRD1Q9NUN5 540 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 NRBP1Q9UHY1 535 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 IQCA1LA6NCM1 817 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 LRRC59Q96AG4 307 aaKnown RBP16.8■□□□□ 0.28
UBR3-201ENST00000272793 ATP5HO75947 161 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 TIMM10P62072 90 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 APBA1Q02410 837 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 COX10Q12887 443 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 SERPINB3P29508 390 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 C10orf53Q8N6V4 93 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 PIGUQ9H490 435 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 FANCEQ9HB96 536 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 MAP3K15Q6ZN16 1313 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 ALDH1L1O75891 902 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 PSMA4P25789 261 aaKnown RBP16.8■□□□□ 0.28
UBR3-201ENST00000272793 SLFN12LQ6IEE8 588 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 KLHL17Q6TDP4 642 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 CENPUQ71F23 418 aa16.8■□□□□ 0.28
UBR3-201ENST00000272793 COPEO14579 308 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 ECEL1O95672 775 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 ACTN3Q08043 901 aaPredicted RBP16.79■□□□□ 0.28
UBR3-201ENST00000272793 KIAA1755Q5JYT7 1200 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 MED7O43513 233 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 ESRP1Q6NXG1 681 aaKnown RBP16.79■□□□□ 0.28
UBR3-201ENST00000272793 ULK3Q6PHR2 472 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 HES6Q96HZ4 224 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 RNF14Q9UBS8 474 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 LOC102724159A0A0B4J2E5 919 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 F5H423 210 aaPredicted RBP16.79■□□□□ 0.28
UBR3-201ENST00000272793 M0R2C6 588 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 PWP2Q15269 919 aaKnown RBP16.79■□□□□ 0.28
UBR3-201ENST00000272793 EXOC3L4Q17RC7 722 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 BNIPLQ7Z465 357 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 EYA3Q99504 573 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 FANCLQ9NW38 375 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 STOML1Q9UBI4 398 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 SERPINB13Q9UIV8 391 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 IPO5O00410 1097 aaKnown RBP16.79■□□□□ 0.28
UBR3-201ENST00000272793 CLEC4MQ9H2X3 399 aaPredicted RBP16.79■□□□□ 0.28
UBR3-201ENST00000272793 OLFML3Q9NRN5 406 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 ZBED1O96006 694 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 YWHABP31946 246 aaKnown RBP16.79■□□□□ 0.28
UBR3-201ENST00000272793 IDI1Q13907 227 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 MRPL50Q8N5N7 158 aaKnown RBP16.79■□□□□ 0.28
UBR3-201ENST00000272793 OLFM1Q99784 485 aa16.79■□□□□ 0.28
UBR3-201ENST00000272793 SNTNA6NMZ2 147 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 XPOTO43592 962 aaKnown RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 RPN2P04844 631 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 S100A1P23297 94 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 FEN1P39748 380 aaKnown RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 MRPS25P82663 173 aaKnown RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 NNTQ13423 1086 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 ELMSAN1Q6PJG2 1045 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 TFCP2L1Q9NZI6 479 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 CCDC141Q6ZP82 1450 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 MEFVO15553 781 aaPredicted RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 MYCP01106 439 aaPredicted RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 RAD23BP54727 409 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 EML4Q9HC35 981 aaKnown RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 SNX14Q9Y5W7 946 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 ERICH3Q5RHP9 1530 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 MDH1BQ5I0G3 518 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 ELMOD1Q8N336 334 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 POLR3EQ9NVU0 708 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 UBA6A0AVT1 1052 aaPredicted RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 GOLGA8TH3BQL2 631 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 AP3B1O00203 1094 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 ARL4DP49703 201 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 RALGDSQ12967 914 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 SULF1Q8IWU6 871 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 PYCARDQ9ULZ3 195 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 EPN1Q9Y6I3 576 aaPredicted RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 NR1D1P20393 614 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 HNRNPH2P55795 449 aaKnown RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 SUZ12Q15022 739 aaKnown RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 NFIL3Q16649 462 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 CATSPER1Q8NEC5 780 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms