RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 FLOT1O75955 427 aa18.28■□□□□ 0.52
SQLE-201ENST00000265896 DRAP1Q14919 205 aaPredicted RBP18.28■□□□□ 0.52
SQLE-201ENST00000265896 DCAF12L1Q5VU92 463 aa18.28■□□□□ 0.52
SQLE-201ENST00000265896 CCDC174Q6PII3 467 aa18.28■□□□□ 0.52
SQLE-201ENST00000265896 CCDC25Q86WR0 208 aa18.28■□□□□ 0.52
SQLE-201ENST00000265896 IQCDQ96DY2 449 aa18.28■□□□□ 0.52
SQLE-201ENST00000265896 LAMB2P55268 1798 aa18.28■□□□□ 0.52
SQLE-201ENST00000265896 ATP2B4P23634 1241 aa18.27■□□□□ 0.52
SQLE-201ENST00000265896 WHAMMQ8TF30 809 aa18.27■□□□□ 0.52
SQLE-201ENST00000265896 SCFD2Q8WU76 684 aa18.27■□□□□ 0.52
SQLE-201ENST00000265896 HOOK2Q96ED9 719 aa18.27■□□□□ 0.52
SQLE-201ENST00000265896 KCNMB3Q9NPA1 279 aa18.27■□□□□ 0.52
SQLE-201ENST00000265896 COL14A1Q05707 1796 aaKnown RBP18.27■□□□□ 0.52
SQLE-201ENST00000265896 KDM3AQ9Y4C1 1321 aa18.27■□□□□ 0.52
SQLE-201ENST00000265896 OPLAHO14841 1288 aa18.27■□□□□ 0.52
SQLE-201ENST00000265896 CAND2O75155 1236 aa18.27■□□□□ 0.52
SQLE-201ENST00000265896 SPIRE1Q08AE8 756 aa18.27■□□□□ 0.52
SQLE-201ENST00000265896 MTFR1LQ9H019 292 aa18.27■□□□□ 0.52
SQLE-201ENST00000265896 NUCKS1Q9H1E3 243 aaKnown RBP18.27■□□□□ 0.52
SQLE-201ENST00000265896 DNAJC12Q9UKB3 198 aa18.27■□□□□ 0.52
SQLE-201ENST00000265896 ATF5Q9Y2D1 282 aaPredicted RBP18.27■□□□□ 0.52
SQLE-201ENST00000265896 GOLGA6L7A0A1B0GV03 622 aa18.27■□□□□ 0.51
SQLE-201ENST00000265896 H0YGN5 161 aa18.27■□□□□ 0.51
SQLE-201ENST00000265896 TGFB1I1O43294 461 aa18.27■□□□□ 0.51
SQLE-201ENST00000265896 GNA14O95837 355 aa18.27■□□□□ 0.51
SQLE-201ENST00000265896 HSPA9P38646 679 aaKnown RBP18.27■□□□□ 0.51
SQLE-201ENST00000265896 NT5DC3Q86UY8 548 aa18.27■□□□□ 0.51
SQLE-201ENST00000265896 C18orf8Q96DM3 657 aa18.27■□□□□ 0.51
SQLE-201ENST00000265896 DDX20Q9UHI6 824 aaKnown RBP18.27■□□□□ 0.51
SQLE-201ENST00000265896 NFS1Q9Y697 457 aa18.27■□□□□ 0.51
SQLE-201ENST00000265896 ABCB11O95342 1321 aa18.27■□□□□ 0.51
SQLE-201ENST00000265896 MYH4Q9Y623 1939 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 TMEM150BA6NC51 233 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 GUCY2CP25092 1073 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 KCNJ1P48048 391 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 DLG4P78352 724 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 B4GALNT4Q76KP1 1039 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 FAM186BQ8IYM0 893 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 MGARPQ8TDB4 240 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 RAPGEF5Q92565 580 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 ALG3Q92685 438 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 KRT35Q92764 455 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 SYN2Q92777 582 aaPredicted RBP18.26■□□□□ 0.51
SQLE-201ENST00000265896 KAT5Q92993 513 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 DYDC2Q96IM9 177 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 EIF2AK1Q9BQI3 630 aaKnown RBP18.26■□□□□ 0.51
SQLE-201ENST00000265896 EDEM3Q9BZQ6 932 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 RABGAP1Q9Y3P9 1069 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 ECM2O94769 699 aaPredicted RBP18.26■□□□□ 0.51
SQLE-201ENST00000265896 FAM13AO94988 1023 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 SEMA3FQ13275 785 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 CERKLQ49MI3 558 aaPredicted RBP18.26■□□□□ 0.51
SQLE-201ENST00000265896 OTUD6AQ7L8S5 288 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 CEP57Q86XR8 500 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 CCDC13Q8IYE1 715 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 ETNPPLQ8TBG4 499 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 CCDC114Q96M63 670 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 POP1Q99575 1024 aaKnown RBP18.26■□□□□ 0.51
SQLE-201ENST00000265896 TMEM59LQ9UK28 342 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 COG5Q9UP83 839 aa18.26■□□□□ 0.51
SQLE-201ENST00000265896 IGKV6D-41A0A0C4DH26 115 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 F5H6K3 240 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 GYS1P13807 737 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 KLRC3Q07444 240 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 DDR1Q08345 913 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 ZNF622Q969S3 477 aaKnown RBP eCLIP18.25■□□□□ 0.51
SQLE-201ENST00000265896 LENG9Q96B70 501 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 CABS1Q96KC9 395 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 SCLT1Q96NL6 688 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 HAUS2Q9NVX0 235 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 GAKO14976 1311 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 NAV1Q8NEY1 1877 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 TCRBV7S2A1N4TA0A589 114 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 DNM1LO00429 736 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 FGFR4P22455 802 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 STAT1P42224 750 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 E2F5Q15329 346 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 APOBEC3HQ6NTF7 200 aaKnown RBP18.25■□□□□ 0.51
SQLE-201ENST00000265896 NSMFQ6X4W1 530 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 CPLX4Q7Z7G2 160 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 RBM17Q96I25 401 aaKnown RBP18.25■□□□□ 0.51
SQLE-201ENST00000265896 WRAP73Q9P2S5 460 aaPredicted RBP18.25■□□□□ 0.51
SQLE-201ENST00000265896 RNF14Q9UBS8 474 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 STRCQ7RTU9 1775 aa18.25■□□□□ 0.51
SQLE-201ENST00000265896 HLA-DOAP06340 250 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 TNFRSF8P28908 595 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 IFI35P80217 286 aaPredicted RBP18.24■□□□□ 0.51
SQLE-201ENST00000265896 ICA1Q05084 483 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 BARGINQ6ZT62 677 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 AMFRQ9UKV5 643 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 HMGB1P1B2RPK0 211 aaPredicted RBP18.24■□□□□ 0.51
SQLE-201ENST00000265896 ECE1P42892 770 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 FNTAP49354 379 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 LRRC14Q15048 493 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 C2CD6Q53TS8 623 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 GPATCH4Q5T3I0 446 aaKnown RBP18.24■□□□□ 0.51
SQLE-201ENST00000265896 TMC3Q7Z5M5 1100 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 SIAH1Q8IUQ4 282 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 SLF2Q8IX21 1173 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 KIRREL3Q8IZU9 778 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms