RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 NPEPPSP55786 919 aa20.9■□□□□ 0.94
CYSTM1-201ENST00000261811 KIAA0319LQ8IZA0 1049 aa20.9■□□□□ 0.94
CYSTM1-201ENST00000261811 KRI1Q8N9T8 703 aaKnown RBP20.9■□□□□ 0.94
CYSTM1-201ENST00000261811 PIGOQ8TEQ8 1089 aa20.9■□□□□ 0.94
CYSTM1-201ENST00000261811 CELF4Q9BZC1 486 aaKnown RBP20.9■□□□□ 0.94
CYSTM1-201ENST00000261811 KIAA1024Q9UPX6 916 aa20.9■□□□□ 0.94
CYSTM1-201ENST00000261811 CDY2AQ9Y6F7 541 aa20.9■□□□□ 0.94
CYSTM1-201ENST00000261811 SQORQ9Y6N5 450 aa20.9■□□□□ 0.94
CYSTM1-201ENST00000261811 ARHGEF35A5YM69 484 aa20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 TMEM150BA6NC51 233 aa20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 SPTLC2O15270 562 aa20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 MARCKSP29966 332 aaPredicted RBP20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 ZRSR1Q15695 479 aaKnown RBP20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 FOXD4L6Q3SYB3 417 aaPredicted RBP20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 POTEGQ6S5H5 508 aa20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 FOXD4L3Q6VB84 417 aaPredicted RBP20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 FAM43BQ6ZT52 329 aaPredicted RBP20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 CABP7Q86V35 215 aa20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 LRRC71Q8N4P6 559 aa20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 ZBTB10Q96DT7 871 aa20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 SCLT1Q96NL6 688 aa20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 MTRQ99707 1265 aa20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 SH2D3AQ9BRG2 576 aa20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 ATP6V0A4Q9HBG4 840 aa20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 DDX19AQ9NUU7 478 aaKnown RBP20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 TFIP11Q9UBB9 837 aaKnown RBP20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 COLQQ9Y215 455 aaPredicted RBP20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 MICAL3Q7RTP6 2002 aa20.89■□□□□ 0.93
CYSTM1-201ENST00000261811 IGKV6-21A0A0C4DH24 114 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 EFCAB14O75071 495 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 PPP6R2O75170 966 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 CHRNA1P02708 482 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 CXCL10P02778 98 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 ACRP10323 421 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 RARRES1P49788 294 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 CLCN3P51790 818 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 CNKSR3Q6P9H4 555 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 ZNF365Q70YC5 407 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 LINC00301Q8NCQ3 95 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 KCNG4Q8TDN1 519 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 SEPT8Q92599 483 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 APBB2Q92870 758 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 DHX33Q9H6R0 707 aaKnown RBP20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 CCDC39Q9UFE4 941 aa20.88■□□□□ 0.93
CYSTM1-201ENST00000261811 PP2D1A8MPX8 630 aa20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 ZBTB39O15060 712 aa20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 ASAP2O43150 1006 aa20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 BAIAP3O94812 1187 aa20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 CDC25AP30304 524 aa20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 CRYBB1P53674 252 aaPredicted RBP20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 KRT85P78386 507 aa20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 TMEM62Q0P6H9 643 aa20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 IKBKEQ14164 716 aa20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 EMC2Q15006 297 aa20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 TMEM240Q5SV17 173 aa20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 MCPH1Q8NEM0 835 aa20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 PSPC1Q8WXF1 523 aaKnown RBP20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 RNPC3Q96LT9 517 aaKnown RBP20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 CEP89Q96ST8 783 aa20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 PRO3102Q9H379 93 aa20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 SUCLA2Q9P2R7 463 aaPredicted RBP20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 FBXO2Q9UK22 296 aaPredicted RBP20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 GINS2Q9Y248 185 aa20.87■□□□□ 0.93
CYSTM1-201ENST00000261811 NBNO60934 754 aa20.86■□□□□ 0.93
CYSTM1-201ENST00000261811 VTNP04004 478 aa20.86■□□□□ 0.93
CYSTM1-201ENST00000261811 NCLP19338 710 aaKnown RBP20.86■□□□□ 0.93
CYSTM1-201ENST00000261811 MGAT3Q09327 533 aa20.86■□□□□ 0.93
CYSTM1-201ENST00000261811 HYIQ5T013 277 aa20.86■□□□□ 0.93
CYSTM1-201ENST00000261811 TRAF7Q6Q0C0 670 aa20.86■□□□□ 0.93
CYSTM1-201ENST00000261811 TSHZ1Q6ZSZ6 1077 aa20.86■□□□□ 0.93
CYSTM1-201ENST00000261811 LINC01465Q8N7H1 131 aa20.86■□□□□ 0.93
CYSTM1-201ENST00000261811 CSRNP2Q9H175 543 aa20.86■□□□□ 0.93
CYSTM1-201ENST00000261811 EYA4O95677 639 aa20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 NLRP11P59045 1033 aaKnown RBP20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 DNM1Q05193 864 aaKnown RBP20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 MXD4Q14582 209 aaPredicted RBP20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 SHHQ15465 462 aa20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 KIZQ2M2Z5 673 aa20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 OTOP2Q7RTS6 562 aa20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 RHPN2Q8IUC4 686 aa20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 NLRP7Q8WX94 980 aa20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 HERVK_113Q902F9 699 aa20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 MMTAG2Q9BU76 263 aaKnown RBP20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 IFIH1Q9BYX4 1025 aaKnown RBP20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 INO80BQ9C086 356 aaPredicted RBP20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 CCSER1Q9C0I3 900 aa20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 BHMT2Q9H2M3 363 aa20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 PCDH10Q9P2E7 1040 aa20.85■□□□□ 0.93
CYSTM1-201ENST00000261811 ABHD14A-ACY1A0A1B0GW23 586 aa20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 ZBBXA8MT70 800 aa20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 USO1O60763 962 aaKnown RBP20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 CUTAO60888 179 aa20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 GHRP10912 638 aa20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 KCNJ6P48051 423 aa20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 EPHB4P54760 987 aa20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 PAK2Q13177 524 aa20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 TFDP1Q14186 410 aa20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 PLEKHG4Q58EX7 1191 aa20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 FBXO47Q5MNV8 452 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms