RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 SYTL1Q8IYJ3 562 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 P3H4Q92791 437 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 TTC25Q96NG3 672 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 DPP7Q9UHL4 492 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 AGO2Q9UKV8 859 aaKnown RBP8.34□□□□□ -1.07
GPNMB-201ENST00000258733 PA2G4Q9UQ80 394 aaKnown RBP8.34□□□□□ -1.07
GPNMB-201ENST00000258733 LRRC42Q9Y546 428 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 WDR7Q9Y4E6 1490 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 NEURL4Q96JN8 1562 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 ANKRD30AQ9BXX3 1397 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 H3BUI4 141 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 RTCAO00442 366 aaKnown RBP8.34□□□□□ -1.07
GPNMB-201ENST00000258733 GUCY1B2O75343 617 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 PDE5AO76074 875 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 ATP6V1C1P21283 382 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 RPL9P32969 192 aaKnown RBP8.34□□□□□ -1.07
GPNMB-201ENST00000258733 GABREP78334 506 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 PDCLQ13371 301 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 RAPGEF1Q13905 1077 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 VWA3BQ502W6 1294 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 MAEAQ7L5Y9 396 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 HCAR2Q8TDS4 363 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 PPP1R10Q96QC0 940 aaKnown RBP8.34□□□□□ -1.07
GPNMB-201ENST00000258733 GPATCH1Q9BRR8 931 aaKnown RBP8.34□□□□□ -1.07
GPNMB-201ENST00000258733 SPATA16Q9BXB7 569 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 TRIM8Q9BZR9 551 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 KCTD10Q9H3F6 313 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 WASH6PQ9NQA3 447 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 HYPKQ9NX55 129 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 EMC3Q9P0I2 261 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 TMEM5Q9Y2B1 443 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 USP16Q9Y5T5 823 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 NPATQ14207 1427 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 EIF2AK4Q9P2K8 1649 aaKnown RBP8.33□□□□□ -1.08
GPNMB-201ENST00000258733 SFI1A8K8P3 1242 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 ERVV-2B6SEH9 535 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 IDH3BO43837 385 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 MLLT6P55198 1093 aaPredicted RBP8.33□□□□□ -1.08
GPNMB-201ENST00000258733 GSTO1P78417 241 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 ZNF268Q14587 947 aaPredicted RBP8.33□□□□□ -1.08
GPNMB-201ENST00000258733 SLC10A5Q5PT55 438 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 CCDC102BQ68D86 513 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 PRR23CQ6ZRP0 262 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 RAPH1Q70E73 1250 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 DDHD1Q8NEL9 900 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 TIPINQ9BVW5 301 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.33□□□□□ -1.08
GPNMB-201ENST00000258733 ADNPQ9H2P0 1102 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 LGR6Q9HBX8 967 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 PTPRHQ9HD43 1115 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 PANK4Q9NVE7 773 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 GGA3Q9NZ52 723 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 DMGDHQ9UI17 866 aaKnown RBP8.33□□□□□ -1.08
GPNMB-201ENST00000258733 CD2APQ9Y5K6 639 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 SAMD9LQ8IVG5 1584 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 ARHGAP10A1A4S6 786 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 ICMTO60725 284 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 FARP2O94887 1054 aaPredicted RBP8.33□□□□□ -1.08
GPNMB-201ENST00000258733 LMNAP02545 664 aaKnown RBP8.33□□□□□ -1.08
GPNMB-201ENST00000258733 KRT13P13646 458 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 GALK1P51570 392 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 ARFIP2P53365 341 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 DAB2IPQ5VWQ8 1189 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 SNRNP48Q6IEG0 339 aaKnown RBP8.33□□□□□ -1.08
GPNMB-201ENST00000258733 FAM83AQ86UY5 434 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 ANKRD53Q8N9V6 530 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 EHD2Q9NZN4 543 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 PCDHB4Q9Y5E5 795 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 NUMBLQ9Y6R0 609 aa8.33□□□□□ -1.08
GPNMB-201ENST00000258733 VWA3AA6NCI4 1184 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 TMEM114B3SHH9 223 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 INO80B-WBP1J3KQ70 363 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 BCAR3O75815 825 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 YEATS4O95619 227 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 TFPTP0C1Z6 253 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 GHRP10912 638 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 PRKAR1BP31321 381 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 GUCY1A2P33402 732 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 PPP1R2P41236 205 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 ANKRD1Q15327 319 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 ANO6Q4KMQ2 910 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 TMEM259Q4ZIN3 620 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 ODF2Q5BJF6 829 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 PPP1R2P3Q6NXS1 205 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 ATG9AQ7Z3C6 839 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 DTX3Q8N9I9 347 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 CCDC63Q8NA47 563 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 MYCBPAPQ8TBZ2 947 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 POM121Q96HA1 1249 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 BTBD6Q96KE9 485 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 FBXL18Q96ME1 805 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 CCT8L2Q96SF2 557 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 GMLQ99445 158 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 TSG101Q99816 390 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 STRIP2Q9ULQ0 834 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 TRAF3IP3Q9Y228 551 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 ATP11BQ9Y2G3 1177 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 PCDHGA8Q9Y5G5 932 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 ATP6V1DQ9Y5K8 247 aa8.32□□□□□ -1.08
GPNMB-201ENST00000258733 MCF2LO15068 1137 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms