RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 TIAM2Q8IVF5 1701 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 BICDL2A1A5D9 508 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 NT5C2P49902 561 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 SLC12A3P55017 1021 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 MRPS25P82663 173 aaKnown RBP12.79□□□□□ -0.36
LIN28A-201ENST00000254231 TRIM32Q13049 653 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 DMP1Q13316 513 aaPredicted RBP12.79□□□□□ -0.36
LIN28A-201ENST00000254231 SYT10Q6XYQ8 523 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 SYT2Q8N9I0 419 aaPredicted RBP12.79□□□□□ -0.36
LIN28A-201ENST00000254231 SLC5A5Q92911 643 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 LSM14BQ9BX40 385 aaKnown RBP12.79□□□□□ -0.36
LIN28A-201ENST00000254231 PDCL3Q9H2J4 239 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 ARMCX3Q9UH62 379 aaPredicted RBP12.79□□□□□ -0.36
LIN28A-201ENST00000254231 RWDD2AQ9UIY3 292 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 LTBP1Q14766 1721 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 PIK3CDO00329 1044 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 AKR1B10O60218 316 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 KIF20AO95235 890 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 CAVIN2O95810 425 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 PLEKP08567 350 aaPredicted RBP12.78□□□□□ -0.36
LIN28A-201ENST00000254231 NUMBP49757 651 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 SMTNP53814 917 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 GPAT2Q6NUI2 795 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 OTUD6AQ7L8S5 288 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 SAPCD2Q86UD0 394 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 DUSP9Q99956 384 aaKnown RBP12.78□□□□□ -0.36
LIN28A-201ENST00000254231 C7orf25Q9BPX7 421 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 PI4K2AQ9BTU6 479 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 PRDM10Q9NQV6 1147 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 TOPORSQ9NS56 1045 aaPredicted RBP12.78□□□□□ -0.36
LIN28A-201ENST00000254231 SETD4Q9NVD3 440 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 NOD1Q9Y239 953 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 MYH7BA7E2Y1 1941 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 IPO7O95373 1038 aaKnown RBP12.78□□□□□ -0.36
LIN28A-201ENST00000254231 SLC9A1P19634 815 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 MAP2K1Q02750 393 aaPredicted RBP12.78□□□□□ -0.36
LIN28A-201ENST00000254231 TAF3Q5VWG9 929 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 IFT74Q96LB3 600 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 RNPEPQ9H4A4 650 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 ACP6Q9NPH0 428 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 FBXO40Q9UH90 709 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 TTC26A0AVF1 554 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 AKR1B15C9JRZ8 316 aaPredicted RBP12.78□□□□□ -0.36
LIN28A-201ENST00000254231 DHX15O43143 795 aaKnown RBP12.78□□□□□ -0.36
LIN28A-201ENST00000254231 ERCC5P28715 1186 aaPredicted RBP12.78□□□□□ -0.36
LIN28A-201ENST00000254231 GNG11P61952 73 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 KIAA1328Q86T90 577 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 TRIML1Q8N9V2 468 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 TARS2Q9BW92 718 aaKnown RBP12.78□□□□□ -0.36
LIN28A-201ENST00000254231 FRMD4BQ9Y2L6 1034 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 UBIAD1Q9Y5Z9 338 aa12.78□□□□□ -0.36
LIN28A-201ENST00000254231 PHACTR2O75167 634 aa12.77□□□□□ -0.36
LIN28A-201ENST00000254231 URI1O94763 535 aaPredicted RBP12.77□□□□□ -0.36
LIN28A-201ENST00000254231 LIG4P49917 911 aa12.77□□□□□ -0.36
LIN28A-201ENST00000254231 ZNF200P98182 395 aaPredicted RBP12.77□□□□□ -0.36
LIN28A-201ENST00000254231 FKBP3Q00688 224 aaKnown RBP12.77□□□□□ -0.36
LIN28A-201ENST00000254231 KRT76Q01546 638 aa12.77□□□□□ -0.36
LIN28A-201ENST00000254231 KIZQ2M2Z5 673 aa12.77□□□□□ -0.36
LIN28A-201ENST00000254231 C2CD6Q53TS8 623 aa12.77□□□□□ -0.36
LIN28A-201ENST00000254231 TOGARAM2Q6ZUX3 1019 aa12.77□□□□□ -0.36
LIN28A-201ENST00000254231 RIOX2Q8IUF8 465 aa12.77□□□□□ -0.36
LIN28A-201ENST00000254231 CHST13Q8NET6 341 aa12.77□□□□□ -0.36
LIN28A-201ENST00000254231 PDLIM2Q96JY6 352 aa12.77□□□□□ -0.36
LIN28A-201ENST00000254231 PARK7Q99497 189 aaKnown RBP12.77□□□□□ -0.36
LIN28A-201ENST00000254231 LRRC27Q9C0I9 530 aa12.77□□□□□ -0.36
LIN28A-201ENST00000254231 NDST4Q9H3R1 872 aa12.77□□□□□ -0.36
LIN28A-201ENST00000254231 ZNHIT6Q9NWK9 470 aaKnown RBP12.77□□□□□ -0.36
LIN28A-201ENST00000254231 QSER1Q2KHR3 1735 aa12.77□□□□□ -0.37
LIN28A-201ENST00000254231 K7ERI5 159 aa12.77□□□□□ -0.37
LIN28A-201ENST00000254231 IKBKBO14920 756 aa12.77□□□□□ -0.37
LIN28A-201ENST00000254231 EPHB6O15197 1021 aa12.77□□□□□ -0.37
LIN28A-201ENST00000254231 NR3C1P04150 777 aa12.77□□□□□ -0.37
LIN28A-201ENST00000254231 CYP3A4P08684 503 aa12.77□□□□□ -0.37
LIN28A-201ENST00000254231 PTPN14Q15678 1187 aa12.77□□□□□ -0.37
LIN28A-201ENST00000254231 EPC2Q52LR7 807 aa12.77□□□□□ -0.37
LIN28A-201ENST00000254231 ARHGAP29Q52LW3 1261 aa12.77□□□□□ -0.37
LIN28A-201ENST00000254231 NLRP7Q8WX94 980 aa12.77□□□□□ -0.37
LIN28A-201ENST00000254231 ZMYND15Q9H091 742 aa12.77□□□□□ -0.37
LIN28A-201ENST00000254231 GBP3Q9H0R5 595 aa12.77□□□□□ -0.37
LIN28A-201ENST00000254231 TRIM10Q9UDY6 481 aa12.77□□□□□ -0.37
LIN28A-201ENST00000254231 AKAP3O75969 853 aa12.76□□□□□ -0.37
LIN28A-201ENST00000254231 XRCC5P13010 732 aaKnown RBP12.76□□□□□ -0.37
LIN28A-201ENST00000254231 COPB2P35606 906 aa12.76□□□□□ -0.37
LIN28A-201ENST00000254231 TTLL4Q14679 1199 aa12.76□□□□□ -0.37
LIN28A-201ENST00000254231 KNOP1Q1ED39 458 aaKnown RBP12.76□□□□□ -0.37
LIN28A-201ENST00000254231 GNASQ5JWF2 1037 aa12.76□□□□□ -0.37
LIN28A-201ENST00000254231 TTI2Q6NXR4 508 aa12.76□□□□□ -0.37
LIN28A-201ENST00000254231 PROCA1Q8NCQ7 364 aaPredicted RBP12.76□□□□□ -0.37
LIN28A-201ENST00000254231 REPS2Q8NFH8 660 aa12.76□□□□□ -0.37
LIN28A-201ENST00000254231 NPLOC4Q8TAT6 608 aa12.76□□□□□ -0.37
LIN28A-201ENST00000254231 MS4A4AQ96JQ5 239 aa12.76□□□□□ -0.37
LIN28A-201ENST00000254231 MPHOSPH6Q99547 160 aaKnown RBP12.76□□□□□ -0.37
LIN28A-201ENST00000254231 BEGAINQ9BUH8 593 aa12.76□□□□□ -0.37
LIN28A-201ENST00000254231 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.76□□□□□ -0.37
LIN28A-201ENST00000254231 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.76□□□□□ -0.37
LIN28A-201ENST00000254231 TFRCP02786 760 aaKnown RBP12.76□□□□□ -0.37
LIN28A-201ENST00000254231 CIITAP33076 1130 aa12.76□□□□□ -0.37
LIN28A-201ENST00000254231 ORC1Q13415 861 aa12.76□□□□□ -0.37
LIN28A-201ENST00000254231 NAA30Q147X3 362 aaPredicted RBP12.76□□□□□ -0.37
LIN28A-201ENST00000254231 FAM117BQ6P1L5 589 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms