RNA–Protein interactions for RNA: ENST00000254037.6

ZCCHC9-201, Transcript of zinc finger CCHC-type containing 9, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZCCHC9, Length 4,606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC9-201ENST00000254037 VPS39Q96JC1 886 aa12.78□□□□□ -0.36
ZCCHC9-201ENST00000254037 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.78□□□□□ -0.361e-6■■■□□ 15.7
ZCCHC9-201ENST00000254037 ANAPC7Q9UJX3 599 aa12.78□□□□□ -0.36
ZCCHC9-201ENST00000254037 MRPL11Q9Y3B7 192 aaKnown RBP12.78□□□□□ -0.36
ZCCHC9-201ENST00000254037 PNPLA6Q8IY17 1366 aa12.78□□□□□ -0.36
ZCCHC9-201ENST00000254037 LRRC53A6NM62 1247 aa12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 MIF4GDA9UHW6 222 aaKnown RBP12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 STXBP3O00186 592 aa12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 TFAMQ00059 246 aaKnown RBP12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 LRRC63Q05C16 580 aa12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 MED21Q13503 144 aa12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 CCNYL1Q8N7R7 359 aa12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 MARCH10Q8NA82 808 aaPredicted RBP12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 SFMBT1Q9UHJ3 866 aa12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 GJA3Q9Y6H8 435 aa12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 CCDC195A0A1B0GUA6 201 aa12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 GAP43P17677 238 aa12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 HLA-DPA1P20036 260 aa12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 MDH1P40925 334 aaKnown RBP12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 YWHAHQ04917 246 aaPredicted RBP12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 OR6B2Q6IFH4 312 aa12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 SPDYE1Q8NFV5 336 aaPredicted RBP12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 TBC1D22AQ8WUA7 517 aa12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 NGRNQ9NPE2 291 aaKnown RBP12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 TSC22D4Q9Y3Q8 395 aa12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 L3MBTL1Q9Y468 752 aa12.77□□□□□ -0.36
ZCCHC9-201ENST00000254037 PHF20L1A8MW92 1017 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 TCP11X1B4DZS4 312 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 PRPSAP2O60256 369 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 SEC24DO94855 1032 aaPredicted RBP12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 CHEK2O96017 543 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 ATP1A1P05023 1023 aaKnown RBP12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 SERPINB3P29508 390 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 OLFML2BQ68BL8 750 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 ZNF473Q8WTR7 871 aaKnown RBP12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 KIF9Q9HAQ2 790 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 ALG13Q9NP73 1137 aaKnown RBP12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 ZSWIM5Q9P217 1185 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 SYNGAP1Q96PV0 1343 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 SEMA3EO15041 775 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 NECTIN1Q15223 517 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 ANGPTL8Q6UXH0 198 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 CATSPER3Q86XQ3 398 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 FAF2Q96CS3 445 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 PAGR1Q9BTK6 254 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 LRRC1Q9BTT6 524 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 STRIP2Q9ULQ0 834 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 GLI2P10070 1586 aa12.77□□□□□ -0.37
ZCCHC9-201ENST00000254037 PRAMEF22A3QJZ6 481 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 HNRNPCL2B2RXH8 293 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 HNRNPCL1O60812 293 aaKnown RBP12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 SERPINB4P48594 390 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 KDSRQ06136 332 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 TMEM154Q6P9G4 183 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 HACE1Q8IYU2 909 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 HIC2Q96JB3 615 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 ZWILCHQ9H900 591 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 KCNA3P22001 575 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 DDIT3P35638 169 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 SEC24CP53992 1094 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 CTSWP56202 376 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 RNF207Q6ZRF8 634 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 ACAD11Q709F0 780 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 SPATA21Q7Z572 469 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 AMNQ9BXJ7 453 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 TRIM15Q9C019 465 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 EPN3Q9H201 632 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 AMACRQ9UHK6 382 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 EIF3HO15372 352 aaKnown RBP eCLIP12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 ATXN8OSP0DMR3 200 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 PTPREP23469 700 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 TAF1BQ53T94 588 aaPredicted RBP12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 PPP6R3Q5H9R7 873 aaPredicted RBP12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 ZC3H12BQ5HYM0 836 aaKnown RBP12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 RARS2Q5T160 578 aaKnown RBP12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 KRT26Q7Z3Y9 468 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 ACCSQ96QU6 501 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 ADAM33Q9BZ11 813 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 SLC13A1Q9BZW2 595 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 GTSE1Q9NYZ3 720 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 CNOT8Q9UFF9 292 aaKnown RBP12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 INO80B-WBP1J3KQ70 363 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 PLA2G4BP0C869 781 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 HDAC4P56524 1084 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 PRAMEP78395 509 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 ICA1Q05084 483 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 TEDDM1Q5T9Z0 273 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 PI16Q6UXB8 463 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 OSBP2Q969R2 916 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 INO80BQ9C086 356 aaPredicted RBP12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 ABCF3Q9NUQ8 709 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 DLGAP2Q9P1A6 1054 aa12.76□□□□□ -0.37
ZCCHC9-201ENST00000254037 IRAK1P51617 712 aa12.75□□□□□ -0.37
ZCCHC9-201ENST00000254037 KRT27Q7Z3Y8 459 aa12.75□□□□□ -0.37
ZCCHC9-201ENST00000254037 FMR1NBQ8N0W7 255 aaPredicted RBP12.75□□□□□ -0.37
ZCCHC9-201ENST00000254037 COA7Q96BR5 231 aa12.75□□□□□ -0.37
ZCCHC9-201ENST00000254037 APOL6Q9BWW8 343 aa12.75□□□□□ -0.37
ZCCHC9-201ENST00000254037 DNAJC12Q9UKB3 198 aa12.75□□□□□ -0.37
ZCCHC9-201ENST00000254037 ARL2BPQ9Y2Y0 163 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms