RNA–Protein interactions for RNA: ENST00000227474.7

PUS3-201, Transcript of pseudouridylate synthase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUS3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUS3-201ENST00000227474 VTI1BQ9UEU0 232 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 LIMA1Q9UHB6 759 aaKnown RBP9.54□□□□□ -0.88
PUS3-201ENST00000227474 BARX2Q9UMQ3 279 aaPredicted RBP9.54□□□□□ -0.88
PUS3-201ENST00000227474 PCDHGB3Q9Y5G1 929 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 SMCO2A6NFE2 343 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 USP17L5A8MUK1 530 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 AP1G2O75843 785 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 PYGBP11216 843 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 NAPAP54920 295 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 KIF22Q14807 665 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 NONOQ15233 471 aaKnown RBP eCLIP9.54□□□□□ -0.88
PUS3-201ENST00000227474 CRTC2Q53ET0 693 aaPredicted RBP9.54□□□□□ -0.88
PUS3-201ENST00000227474 EEPD1Q7L9B9 569 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 VPS52Q8N1B4 723 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 DRAXINQ8NBI3 349 aaPredicted RBP9.54□□□□□ -0.88
PUS3-201ENST00000227474 OR8H1Q8NGG4 311 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 TIFAQ96CG3 184 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 ZMAT2Q96NC0 199 aaKnown RBP9.54□□□□□ -0.88
PUS3-201ENST00000227474 CTAGE1Q96RT6 745 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 ZC3H12CQ9C0D7 883 aaKnown RBP9.54□□□□□ -0.88
PUS3-201ENST00000227474 BLZF1Q9H2G9 400 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 L2HGDHQ9H9P8 463 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 ZCCHC17Q9NP64 241 aaKnown RBP9.54□□□□□ -0.88
PUS3-201ENST00000227474 KBTBD4Q9NVX7 518 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 TMX2Q9Y320 296 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 C2CD2Q9Y426 696 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 SLC30A1Q9Y6M5 507 aa9.54□□□□□ -0.88
PUS3-201ENST00000227474 ANKRD31Q8N7Z5 1873 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 CDK5RAP2Q96SN8 1893 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 RIMBP2O15034 1052 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 KLRC4O43908 158 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 SORBS3O60504 671 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 STAT6P42226 847 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 CLCN6P51797 869 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 FKBP1AP62942 108 aaKnown RBP9.53□□□□□ -0.88
PUS3-201ENST00000227474 NCBP1Q09161 790 aaKnown RBP9.53□□□□□ -0.88
PUS3-201ENST00000227474 KARSQ15046 597 aaKnown RBP9.53□□□□□ -0.88
PUS3-201ENST00000227474 APOBEC3HQ6NTF7 200 aaKnown RBP9.53□□□□□ -0.88
PUS3-201ENST00000227474 TRIM65Q6PJ69 517 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 KRT26Q7Z3Y9 468 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 GALNT5Q7Z7M9 940 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 SMYD4Q8IYR2 804 aaPredicted RBP9.53□□□□□ -0.88
PUS3-201ENST00000227474 FLAD1Q8NFF5 587 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 STAMQ92783 540 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 THAP11Q96EK4 314 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 MASTLQ96GX5 879 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 PANX2Q96RD6 677 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 PIGSQ96S52 555 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 EHD4Q9H223 541 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 CPVLQ9H3G5 476 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 USP40Q9NVE5 1235 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 CEP72Q9P209 647 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 GTF2IRD1Q9UHL9 959 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 FOCADQ5VW36 1801 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 ITIH6Q6UXX5 1313 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 PHLPP2Q6ZVD8 1323 aa9.53□□□□□ -0.88
PUS3-201ENST00000227474 TEX33O43247 280 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 OR52Z1P0C646 297 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 GZMAP12544 262 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 AKR1B1P15121 316 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 SHMT1P34896 483 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 STX17P56962 302 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 ETF1P62495 437 aaKnown RBP9.52□□□□□ -0.89
PUS3-201ENST00000227474 SPAG1Q07617 926 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 GOLGA8FQ08AF8 430 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 GOLGA8DPQ0D2H9 430 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 PAK1Q13153 545 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 HSP90AA4PQ58FG1 418 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 RRAGBQ5VZM2 374 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 DPP8Q6V1X1 898 aaPredicted RBP9.52□□□□□ -0.89
PUS3-201ENST00000227474 RSRC2Q7L4I2 434 aaKnown RBP9.52□□□□□ -0.89
PUS3-201ENST00000227474 NEK8Q86SG6 692 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 NCAPG2Q86XI2 1143 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 ADSSL1Q8N142 457 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 BRSK1Q8TDC3 778 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 MTMR8Q96EF0 704 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 RBM18Q96H35 190 aaKnown RBP9.52□□□□□ -0.89
PUS3-201ENST00000227474 DEPDC7Q96QD5 511 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 ALPK1Q96QP1 1244 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 ZNHIT6Q9NWK9 470 aaKnown RBP9.52□□□□□ -0.89
PUS3-201ENST00000227474 QPCTLQ9NXS2 382 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 SEC63Q9UGP8 760 aaKnown RBP9.52□□□□□ -0.89
PUS3-201ENST00000227474 EGFL7Q9UHF1 273 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 CTNND2Q9UQB3 1225 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 TMEM98Q9Y2Y6 226 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 SNCAIPQ9Y6H5 919 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 PP2D1A8MPX8 630 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 AKR1B15C9JRZ8 316 aaPredicted RBP9.52□□□□□ -0.89
PUS3-201ENST00000227474 ZSCAN12O43309 604 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 EDIL3O43854 480 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 TTLL1O95922 423 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 PGRP06401 933 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 ZNF24P17028 368 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 CDC25AP30304 524 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 ZNF543Q08ER8 600 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 CDC42EP5Q6NZY7 148 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 FAM180BQ6P0A1 224 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 MYLK4Q86YV6 388 aaPredicted RBP9.52□□□□□ -0.89
PUS3-201ENST00000227474 FBXO22Q8NEZ5 403 aa9.52□□□□□ -0.89
PUS3-201ENST00000227474 LRRC15Q8TF66 581 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms