RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 RSRC2Q7L4I2 434 aaKnown RBP17.37■□□□□ 0.37
HDAC5-201ENST00000225983 PLA2G12BQ9BX93 195 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 CCDC68Q9H2F9 335 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 GINM1Q9NU53 330 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 ADAM22Q9P0K1 906 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
HDAC5-201ENST00000225983 MKRN3Q13064 507 aaKnown RBP17.37■□□□□ 0.37
HDAC5-201ENST00000225983 C12orf60Q5U649 245 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 PTPRMP28827 1452 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 PSMA2P25787 234 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 GUF1Q8N442 669 aaKnown RBP17.37■□□□□ 0.37
HDAC5-201ENST00000225983 NEDD1Q8NHV4 660 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 CCHCR1Q8TD31 782 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 FAM213AQ9BRX8 229 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 PHF20Q9BVI0 1012 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 CCZ1BP86790 482 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 CCZ1P86791 482 aaPredicted RBP17.37■□□□□ 0.37
HDAC5-201ENST00000225983 SEPT6Q14141 434 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 MMEL1Q495T6 779 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 TMED8Q6PL24 325 aaPredicted RBP17.37■□□□□ 0.37
HDAC5-201ENST00000225983 C4orf50Q6ZRC1 276 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 RTKN2Q8IZC4 609 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 DDX47Q9H0S4 455 aaKnown RBP17.37■□□□□ 0.37
HDAC5-201ENST00000225983 CPS1P31327 1500 aa17.37■□□□□ 0.37
HDAC5-201ENST00000225983 C6orf118Q5T5N4 469 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 HDAC11Q96DB2 347 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 THOC1Q96FV9 657 aaKnown RBP17.36■□□□□ 0.37
HDAC5-201ENST00000225983 NPHP3-ACAD11A0A0J9YXS1 232 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 CA4P22748 312 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 RXRBP28702 533 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 GPC5P78333 572 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 DRAP1Q14919 205 aaPredicted RBP17.36■□□□□ 0.37
HDAC5-201ENST00000225983 SLFN12LQ6IEE8 588 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 ATP6V0A4Q9HBG4 840 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 IFT122Q9HBG6 1241 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.36■□□□□ 0.37
HDAC5-201ENST00000225983 ADCY2Q08462 1091 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 MYO1EQ12965 1108 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 E4F1Q66K89 784 aaPredicted RBP17.36■□□□□ 0.37
HDAC5-201ENST00000225983 PODNQ7Z5L7 613 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 ZNF18P17022 549 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 EXOC8Q8IYI6 725 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 CEP120Q8N960 986 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 PYROXD1Q8WU10 500 aa17.36■□□□□ 0.37
HDAC5-201ENST00000225983 GPC4O75487 556 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 TOM1L1O75674 476 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 TRIM49P0CI25 452 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 TRIM49CP0CI26 452 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 FDPSP14324 419 aaKnown RBP17.35■□□□□ 0.37
HDAC5-201ENST00000225983 IRX4P78413 519 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 HDLBPQ00341 1268 aaKnown RBP17.35■□□□□ 0.37
HDAC5-201ENST00000225983 NUGGCQ68CJ6 796 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 INTS2Q9H0H0 1204 aaKnown RBP17.35■□□□□ 0.37
HDAC5-201ENST00000225983 SAYSD1Q9NPB0 183 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 SCINQ9Y6U3 715 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 RBBP5Q15291 538 aaKnown RBP17.35■□□□□ 0.37
HDAC5-201ENST00000225983 DALRD3Q5D0E6 543 aaKnown RBP17.35■□□□□ 0.37
HDAC5-201ENST00000225983 TMEM270Q6UE05 265 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 USP49Q70CQ1 688 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 ARMC9Q7Z3E5 817 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 LRRC4Q9HBW1 653 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 SYNGAP1Q96PV0 1343 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 IQSEC2Q5JU85 1478 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 DBN1Q16643 649 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 ELAC2Q9BQ52 826 aaKnown RBP17.35■□□□□ 0.37
HDAC5-201ENST00000225983 EPB41L4AQ9HCS5 686 aaPredicted RBP17.35■□□□□ 0.37
HDAC5-201ENST00000225983 FEM1BQ9UK73 627 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 DENND3A2RUS2 1198 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 WDR64B1ANS9 1081 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 PODXLO00592 558 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 CTDNEP1O95476 244 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 ORC2Q13416 577 aaPredicted RBP17.35■□□□□ 0.37
HDAC5-201ENST00000225983 SAAL1Q96ER3 474 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 C11orf70Q9BRQ4 267 aa17.35■□□□□ 0.37
HDAC5-201ENST00000225983 GCKP35557 465 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 ZNF449Q6P9G9 518 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 CENPUQ71F23 418 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 CHP1Q99653 195 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 A0A1W2PQC6 194 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 MIF4GDA9UHW6 222 aaKnown RBP17.34■□□□□ 0.37
HDAC5-201ENST00000225983 VAMP7P51809 220 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 NFIXQ14938 502 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 HIBCHQ6NVY1 386 aaPredicted RBP17.34■□□□□ 0.37
HDAC5-201ENST00000225983 EIF2AK1Q9BQI3 630 aaKnown RBP17.34■□□□□ 0.37
HDAC5-201ENST00000225983 LXNQ9BS40 222 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 NGRNQ9NPE2 291 aaKnown RBP17.34■□□□□ 0.37
HDAC5-201ENST00000225983 CAPN11Q9UMQ6 739 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 DIS3Q9Y2L1 958 aaKnown RBP17.34■□□□□ 0.37
HDAC5-201ENST00000225983 ZBED1O96006 694 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 MMEP08473 750 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 SLC27A3Q5K4L6 730 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 JADE1Q6IE81 842 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 SNRNP48Q6IEG0 339 aaKnown RBP17.34■□□□□ 0.37
HDAC5-201ENST00000225983 FIS1Q9Y3D6 152 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 PPRC1Q5VV67 1664 aaKnown RBP17.34■□□□□ 0.37
HDAC5-201ENST00000225983 CLEC10AQ8IUN9 316 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 GLYCTKQ8IVS8 523 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 PDIK1LQ8N165 341 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 AP5M1Q9H0R1 490 aa17.34■□□□□ 0.37
HDAC5-201ENST00000225983 CLDN3O15551 220 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms