RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 C14orf80Q86SX3 495 aa11.44□□□□□ -0.58
VPS18-201ENST00000220509 MB21D1Q8N884 522 aa11.44□□□□□ -0.58
VPS18-201ENST00000220509 LMBR1Q8WVP7 490 aa11.44□□□□□ -0.58
VPS18-201ENST00000220509 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.44□□□□□ -0.588e-7■■■■■ 32.7
VPS18-201ENST00000220509 LACRTQ9GZZ8 138 aa11.44□□□□□ -0.58
VPS18-201ENST00000220509 BHMT2Q9H2M3 363 aa11.44□□□□□ -0.58
VPS18-201ENST00000220509 HPSEQ9Y251 543 aa11.44□□□□□ -0.58
VPS18-201ENST00000220509 TOGARAM1Q9Y4F4 1720 aa11.44□□□□□ -0.58
VPS18-201ENST00000220509 TNFAIP3P21580 790 aa11.44□□□□□ -0.58
VPS18-201ENST00000220509 RASSF7Q02833 373 aa11.44□□□□□ -0.58
VPS18-201ENST00000220509 FBXL16Q8N461 479 aa11.44□□□□□ -0.58
VPS18-201ENST00000220509 POTEB3A0JP26 581 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 POTECB2RU33 542 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 PLSCR1O15162 318 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 DPEP1P16444 411 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 CETN2P41208 172 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 BIRC3Q13489 604 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 PPP1R7Q15435 360 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 PKN1Q16512 942 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 VWA3BQ502W6 1294 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 ODR4Q5SWX8 454 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 POTEBQ6S5H4 581 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 TMEM179Q6ZVK1 233 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 SLC7A5P2Q9GIP4 190 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 TAOK3Q9H2K8 898 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 NDST4Q9H3R1 872 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 DNAAF2Q9NVR5 837 aaKnown RBP11.43□□□□□ -0.58
VPS18-201ENST00000220509 COL4A3BPQ9Y5P4 624 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 ZBED4O75132 1171 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 SMARCA1P28370 1054 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 STAT3P40763 770 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 PDIA5Q14554 519 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 MAN2A1Q16706 1144 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 PREPLQ4J6C6 727 aaPredicted RBP11.43□□□□□ -0.58
VPS18-201ENST00000220509 CDC42EP5Q6NZY7 148 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 CCNI2Q6ZMN8 369 aaPredicted RBP11.43□□□□□ -0.58
VPS18-201ENST00000220509 USP37Q86T82 979 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 PIGOQ8TEQ8 1089 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 SELENOSQ9BQE4 189 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 EMILIN3Q9NT22 766 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 ANKRD62A6NC57 917 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 GOLGA8KD6RF30 607 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 STXBP3O00186 592 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 ONECUT3O60422 494 aaPredicted RBP11.43□□□□□ -0.58
VPS18-201ENST00000220509 BUB1BO60566 1050 aaPredicted RBP11.43□□□□□ -0.58
VPS18-201ENST00000220509 ZNF18P17022 549 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 KLK7P49862 253 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 SH3BGRP55822 239 aaPredicted RBP11.43□□□□□ -0.58
VPS18-201ENST00000220509 DPYDQ12882 1025 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 MS4A14Q96JA4 679 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 SPZ1Q9BXG8 430 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 RTFDC1Q9BY42 306 aaPredicted RBP11.43□□□□□ -0.58
VPS18-201ENST00000220509 AGPAT5Q9NUQ2 364 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 MRGBPQ9NV56 204 aa11.43□□□□□ -0.58
VPS18-201ENST00000220509 GPR75-ASB3A0A0A6YYF3 556 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 GOLGA6L10A0A0M3HER8 536 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 ZSCAN5CA6NGD5 496 aaPredicted RBP11.42□□□□□ -0.58
VPS18-201ENST00000220509 hCG_1984214I3L0E3 225 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 TIMM44O43615 452 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 MMEP08473 750 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 PDHBP11177 359 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 KRT5P13647 590 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 DESP17661 470 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 CTTNQ14247 550 aaKnown RBP11.42□□□□□ -0.58
VPS18-201ENST00000220509 ZNF713Q8N859 430 aaPredicted RBP11.42□□□□□ -0.58
VPS18-201ENST00000220509 VTI1AQ96AJ9 217 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 CCDC127Q96BQ5 260 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 KRT12Q99456 494 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 TMEM98Q9Y2Y6 226 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 F8VZ95 297 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 CREB3O43889 395 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 PRPF6O94906 941 aaKnown RBP11.42□□□□□ -0.58
VPS18-201ENST00000220509 HEXIM1O94992 359 aaKnown RBP11.42□□□□□ -0.58
VPS18-201ENST00000220509 NR1D1P20393 614 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 STIP1P31948 543 aaKnown RBP11.42□□□□□ -0.58
VPS18-201ENST00000220509 SMTNP53814 917 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 DEUP1Q05D60 604 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 TSNAXIP1Q2TAA8 658 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 C16orf86Q6ZW13 317 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 CERS5Q8N5B7 392 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 ZNF577Q9BSK1 485 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 BRD8Q9H0E9 1235 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 THAP9Q9H5L6 903 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 METTL14Q9HCE5 456 aaKnown RBP11.42□□□□□ -0.58
VPS18-201ENST00000220509 POTEFA5A3E0 1075 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 PDE2AO00408 941 aaPredicted RBP11.42□□□□□ -0.58
VPS18-201ENST00000220509 RTN2O75298 545 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 POTEIP0CG38 1075 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 ARHGAP4P98171 946 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 POTEGQ6S5H5 508 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 POTEEQ6S8J3 1075 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 ZFPM1Q8IX07 1006 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 USP33Q8TEY7 942 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 U2AF1L4Q8WU68 220 aaKnown RBP11.42□□□□□ -0.58
VPS18-201ENST00000220509 TRIM9Q9C026 710 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 IRF2BPLQ9H1B7 796 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 NHEJ1Q9H9Q4 299 aaPredicted RBP11.42□□□□□ -0.58
VPS18-201ENST00000220509 KLC4Q9NSK0 619 aa11.42□□□□□ -0.58
VPS18-201ENST00000220509 PACSIN2Q9UNF0 486 aaPredicted RBP11.42□□□□□ -0.58
VPS18-201ENST00000220509 LGALS16A8MUM7 142 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms