RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 BTBD7Q9P203 1132 aa11.81□□□□□ -0.52
USP31-201ENST00000219689 P4HA2O15460 535 aa11.81□□□□□ -0.52
USP31-201ENST00000219689 GOLGA8HP0CJ92 632 aa11.81□□□□□ -0.52
USP31-201ENST00000219689 STX3Q13277 289 aa11.81□□□□□ -0.52
USP31-201ENST00000219689 TRIM74Q86UV6 250 aa11.81□□□□□ -0.52
USP31-201ENST00000219689 TRIM73Q86UV7 250 aa11.81□□□□□ -0.52
USP31-201ENST00000219689 ST13P5Q8NFI4 369 aaPredicted RBP11.81□□□□□ -0.52
USP31-201ENST00000219689 GIPC2Q8TF65 315 aa11.81□□□□□ -0.52
USP31-201ENST00000219689 PCDHB4Q9Y5E5 795 aa11.81□□□□□ -0.52
USP31-201ENST00000219689 PODXLO00592 558 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 STRNO43815 780 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 MORF4L2Q15014 288 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 PATL1Q86TB9 770 aaKnown RBP11.8□□□□□ -0.52
USP31-201ENST00000219689 EDEM3Q9BZQ6 932 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 COL17A1Q9UMD9 1497 aaPredicted RBP11.8□□□□□ -0.52
USP31-201ENST00000219689 ESPL1Q14674 2120 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 PI4K2BG5E9Z4 385 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 KRT25Q7Z3Z0 450 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 KCTD6Q8NC69 237 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 ZNF555Q8NEP9 628 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 ZIM3Q96PE6 472 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 IPO11Q9UI26 975 aaKnown RBP11.8□□□□□ -0.52
USP31-201ENST00000219689 AKAP6Q13023 2319 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 H3BQF6 201 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 HNRNPRO43390 633 aaKnown RBP11.8□□□□□ -0.52
USP31-201ENST00000219689 MKRN3Q13064 507 aaKnown RBP11.8□□□□□ -0.52
USP31-201ENST00000219689 PCM1Q15154 2024 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 UBE4BO95155 1302 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 CDHR2Q9BYE9 1310 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 IL10P22301 178 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 C16orf72Q14CZ0 275 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 C3orf20Q8ND61 904 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 PNKPQ96T60 521 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 INSRP06213 1382 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 BTBD18B2RXH4 712 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 HSPA6P17066 643 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 ADCY7P51828 1080 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 SLC9A5Q14940 896 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 NCAPHQ15003 741 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 SPATA4Q8NEY3 305 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 CAPSLQ8WWF8 208 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 NAF1Q96HR8 494 aaKnown RBP11.8□□□□□ -0.52
USP31-201ENST00000219689 THAP9Q9H5L6 903 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 CYLDQ9NQC7 956 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 CEP290O15078 2479 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 AQRO60306 1485 aaKnown RBP eCLIP11.8□□□□□ -0.524e-7■■■□□ 18.5
USP31-201ENST00000219689 TBC1D4O60343 1298 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 OCM2P0CE71 109 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 OCMP0CE72 109 aaPredicted RBP11.8□□□□□ -0.52
USP31-201ENST00000219689 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
USP31-201ENST00000219689 ANO4Q32M45 955 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 XPO6Q96QU8 1125 aaKnown RBP11.8□□□□□ -0.52
USP31-201ENST00000219689 IRX2Q9BZI1 471 aaPredicted RBP11.8□□□□□ -0.52
USP31-201ENST00000219689 SYNGAP1Q96PV0 1343 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 YWHAHQ04917 246 aaPredicted RBP11.8□□□□□ -0.52
USP31-201ENST00000219689 PRPF39Q86UA1 669 aaKnown RBP11.8□□□□□ -0.52
USP31-201ENST00000219689 OR2W6PQ8NHA6 318 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 TUBGCP3Q96CW5 907 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 DKK3Q9UBP4 350 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 RCOR1Q9UKL0 485 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 C2CD2Q9Y426 696 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 LARGE1O95461 756 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 PYGLP06737 847 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 PDIA3P30101 505 aaKnown RBP11.8□□□□□ -0.52
USP31-201ENST00000219689 CAPRIN1Q14444 709 aaKnown RBP11.8□□□□□ -0.52
USP31-201ENST00000219689 PGBD1Q96JS3 809 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 POLE3Q9NRF9 147 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 C1orf112Q9NSG2 853 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 ADGRG1Q9Y653 693 aa11.8□□□□□ -0.52
USP31-201ENST00000219689 GOLGA8RI6L899 631 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 DLATP10515 647 aaKnown RBP11.79□□□□□ -0.52
USP31-201ENST00000219689 KLC3Q6P597 504 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 TRIM67Q6ZTA4 783 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 APPBP2Q92624 585 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 PAGE5Q96GU1 130 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 LUZP2Q86TE4 346 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 ZC3H15Q8WU90 426 aaKnown RBP11.79□□□□□ -0.52
USP31-201ENST00000219689 TRIM10Q9UDY6 481 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 TRAPPC10P48553 1259 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 MTTPP55157 894 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 SMCR8Q8TEV9 937 aaPredicted RBP11.79□□□□□ -0.52
USP31-201ENST00000219689 MYO7AQ13402 2215 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 SNRPA1P09661 255 aaKnown RBP11.79□□□□□ -0.52
USP31-201ENST00000219689 USP33Q8TEY7 942 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 EXT2Q93063 718 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 CAAP1Q9H8G2 361 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 GTSE1Q9NYZ3 720 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 C15orf41Q9Y2V0 281 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 XPOTO43592 962 aaKnown RBP11.79□□□□□ -0.52
USP31-201ENST00000219689 HSPD1P10809 573 aaKnown RBP11.79□□□□□ -0.52
USP31-201ENST00000219689 ATP4AP20648 1035 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 HDDC2Q7Z4H3 204 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 AGR3Q8TD06 166 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 ZCWPW1Q9H0M4 648 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 DAPK2Q9UIK4 370 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 USP19O94966 1318 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 ABCC2Q92887 1545 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 ITIH4Q14624 930 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 RESP18Q5W5W9 173 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 SYBUQ9NX95 663 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms