RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ZHX2Q9Y6X8 837 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 CTNND1O60716 968 aaKnown RBP10.92□□□□□ -0.66
USP11-201ENST00000218348 USO1O60763 962 aaKnown RBP10.92□□□□□ -0.66
USP11-201ENST00000218348 ECM2O94769 699 aaPredicted RBP10.92□□□□□ -0.66
USP11-201ENST00000218348 TRIM49P0CI25 452 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 TRIM49CP0CI26 452 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 KIF5AQ12840 1032 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 PSMD2Q13200 908 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 EAPPQ56P03 285 aaPredicted RBP10.92□□□□□ -0.66
USP11-201ENST00000218348 ARMC3Q5W041 872 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 SYCP3Q8IZU3 236 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 ERGIC2Q96RQ1 377 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 NAP1L4Q99733 375 aaKnown RBP10.92□□□□□ -0.66
USP11-201ENST00000218348 KCTD10Q9H3F6 313 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 GPRC5CQ9NQ84 441 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 KCNH7Q9NS40 1196 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 ADAMTS1Q9UHI8 967 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 EFCAB8A8MWE9 144 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 FAM155AB1AL88 458 aaPredicted RBP10.92□□□□□ -0.66
USP11-201ENST00000218348 MAGEA1P43355 309 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 RPS6P62753 249 aaKnown RBP10.92□□□□□ -0.66
USP11-201ENST00000218348 GOLGA1Q92805 767 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 FAM84AQ96KN4 292 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 NUP58Q9BVL2 599 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 RANBP17Q9H2T7 1088 aaKnown RBP10.92□□□□□ -0.66
USP11-201ENST00000218348 ARMCX3Q9UH62 379 aaPredicted RBP10.92□□□□□ -0.66
USP11-201ENST00000218348 MYO6Q9UM54 1294 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 CAPN6Q9Y6Q1 641 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 MYH10P35580 1976 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 ARHGEF35A5YM69 484 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 VCAM1P19320 739 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 NPEPPSP55786 919 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 VGLL4Q14135 290 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 KNOP1Q1ED39 458 aaKnown RBP10.92□□□□□ -0.66
USP11-201ENST00000218348 ZCWPW2Q504Y3 356 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 MIER3Q7Z3K6 550 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 SULF1Q8IWU6 871 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 SLC24A3Q9HC58 644 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 GINM1Q9NU53 330 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 PACSIN2Q9UNF0 486 aaPredicted RBP10.92□□□□□ -0.66
USP11-201ENST00000218348 USP20Q9Y2K6 914 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 AFG3L2Q9Y4W6 797 aa10.92□□□□□ -0.66
USP11-201ENST00000218348 TMCO5BA8MYB1 307 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 KRT86O43790 486 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 ATP9AO75110 1047 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 PSMD10O75832 226 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 PTPRAP18433 802 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 KRT83P78385 493 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 PLA2G4FQ68DD2 849 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 FAM178BQ8IXR5 827 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 SPAG5Q96R06 1193 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 PNKPQ96T60 521 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 KIFC3Q9BVG8 833 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 SH2D4AQ9H788 454 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 GPBP1L1Q9HC44 474 aaPredicted RBP10.91□□□□□ -0.66
USP11-201ENST00000218348 ZCCHC17Q9NP64 241 aaKnown RBP10.91□□□□□ -0.66
USP11-201ENST00000218348 IRAK4Q9NWZ3 460 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 SALL4Q9UJQ4 1053 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 FEM1BQ9UK73 627 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 PCDHA13Q9Y5I0 950 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 ZNF536O15090 1300 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 LRRN2O75325 713 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 NR3C1P04150 777 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 PPP1R2P41236 205 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 ZC3H12AQ5D1E8 599 aaKnown RBP10.91□□□□□ -0.66
USP11-201ENST00000218348 HYIQ5T013 277 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 GSPT2Q8IYD1 628 aaKnown RBP10.91□□□□□ -0.66
USP11-201ENST00000218348 MBOAT7Q96N66 472 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 MMS19Q96T76 1030 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 HSD17B14Q9BPX1 270 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 PACSIN1Q9BY11 444 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 CTAGE15A4D2H0 777 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 DCAF8L1A6NGE4 600 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 H0YHG0 523 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 TOMM70O94826 608 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 EYA4O95677 639 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 CTAGE8P0CG41 777 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 YY1P25490 414 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 FKBP1BP68106 108 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 SARNPP82979 210 aaKnown RBP10.91□□□□□ -0.66
USP11-201ENST00000218348 SRGAP1Q7Z6B7 1085 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 CTAGE6Q86UF2 777 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 CTAGE4Q8IX94 777 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 SCYL3Q8IZE3 742 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 CLMNQ96JQ2 1002 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 RMDN3Q96TC7 470 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 TEKT3Q9BXF9 490 aa10.91□□□□□ -0.66
USP11-201ENST00000218348 GOLGA8IPA6NC78 632 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 GOLGA8JA6NMD2 632 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 TLR2O60603 784 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 NOL4O94818 638 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 CIITAP33076 1130 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 BAATQ14032 418 aaPredicted RBP10.9□□□□□ -0.66
USP11-201ENST00000218348 ZSWIM2Q8NEG5 633 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 BAP1Q92560 729 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 HAUS4Q9H6D7 363 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 SEPT11Q9NVA2 429 aaKnown RBP10.9□□□□□ -0.66
USP11-201ENST00000218348 ARGLU1Q9NWB6 273 aaPredicted RBP10.9□□□□□ -0.66
USP11-201ENST00000218348 PLAGL2Q9UPG8 496 aa10.9□□□□□ -0.66
USP11-201ENST00000218348 KCNH4Q9UQ05 1017 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms